RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C SWM1Q12379 170 aa12.09□□□□□ -0.47
SSA1YAL005C ENA5Q12691 1091 aa12.09□□□□□ -0.47
SSA1YAL005C YEF1P32622 495 aa12.09□□□□□ -0.47
SSA1YAL005C TPO5P36029 618 aa12.09□□□□□ -0.47
SSA1YAL005C ECO1P43605 281 aa12.09□□□□□ -0.47
SSA1YAL005C IDS2P46958 469 aa12.09□□□□□ -0.47
SSA1YAL005C ATG4P53867 494 aa12.09□□□□□ -0.47
SSA1YAL005C YDR249CQ03787 373 aa12.09□□□□□ -0.47
SSA1YAL005C RLM1Q12224 676 aa12.09□□□□□ -0.47
SSA1YAL005C HER1Q12276 1246 aa12.09□□□□□ -0.47
SSA1YAL005C CTA1P15202 515 aa12.08□□□□□ -0.48
SSA1YAL005C RPB8P20436 146 aa12.08□□□□□ -0.48
SSA1YAL005C MRPS28P21771 286 aa12.08□□□□□ -0.48
SSA1YAL005C IDP1P21954 428 aaKnown RBP12.08□□□□□ -0.48
SSA1YAL005C NDC1P32500 655 aa12.08□□□□□ -0.48
SSA1YAL005C GPX1P36014 167 aa12.08□□□□□ -0.48
SSA1YAL005C PHB1P40961 287 aa12.08□□□□□ -0.48
SSA1YAL005C ECL1P48235 211 aa12.08□□□□□ -0.48
SSA1YAL005C MIX14Q04341 121 aa12.08□□□□□ -0.48
SSA1YAL005C COX20Q04935 205 aa12.08□□□□□ -0.48
SSA1YAL005C YPR109WQ06104 294 aa12.08□□□□□ -0.48
SSA1YAL005C NTG2Q08214 380 aa12.08□□□□□ -0.48
SSA1YAL005C HAP4P14064 554 aa12.07□□□□□ -0.48
SSA1YAL005C ERG8P24521 451 aa12.07□□□□□ -0.48
SSA1YAL005C NUD1P32336 851 aa12.07□□□□□ -0.48
SSA1YAL005C TRS65P32893 560 aa12.07□□□□□ -0.48
SSA1YAL005C SLC1P33333 303 aa12.07□□□□□ -0.48
SSA1YAL005C YKL071WP36086 256 aa12.07□□□□□ -0.48
SSA1YAL005C BAP2P38084 609 aa12.07□□□□□ -0.48
SSA1YAL005C YER010CP40011 234 aa12.07□□□□□ -0.48
SSA1YAL005C MPP6P53725 186 aaPredicted RBP12.07□□□□□ -0.48
SSA1YAL005C PGA1P53896 198 aa12.07□□□□□ -0.48
SSA1YAL005C COQ10Q08058 207 aa12.07□□□□□ -0.48
SSA1YAL005C CYT1P07143 309 aa12.07□□□□□ -0.48
SSA1YAL005C EHD3P28817 500 aa12.07□□□□□ -0.48
SSA1YAL005C VMA6P32366 345 aaKnown RBP12.07□□□□□ -0.48
SSA1YAL005C YLR040CQ07988 224 aa12.07□□□□□ -0.48
SSA1YAL005C HRT1Q08273 121 aa12.07□□□□□ -0.48
SSA1YAL005C YOR289WQ12012 251 aaPredicted RBP12.07□□□□□ -0.48
SSA1YAL005C SCO1P23833 295 aa12.06□□□□□ -0.48
SSA1YAL005C YKR073CP36153 106 aa12.06□□□□□ -0.48
SSA1YAL005C RRN9P53437 365 aa12.06□□□□□ -0.48
SSA1YAL005C BUD17P53727 317 aa12.06□□□□□ -0.48
SSA1YAL005C ARP10Q04549 284 aa12.06□□□□□ -0.48
SSA1YAL005C YPQ2Q06328 317 aa12.06□□□□□ -0.48
SSA1YAL005C YHR214C-DP0CX93 97 aa12.05□□□□□ -0.48
SSA1YAL005C NUP1P20676 1076 aa12.05□□□□□ -0.48
SSA1YAL005C NIC96P34077 839 aa12.05□□□□□ -0.48
SSA1YAL005C RSM22P36056 628 aa12.05□□□□□ -0.48
SSA1YAL005C MDM31P38880 579 aa12.05□□□□□ -0.48
SSA1YAL005C SEC24P40482 926 aaKnown RBP12.05□□□□□ -0.48
SSA1YAL005C FIN1Q03898 291 aa12.05□□□□□ -0.48
SSA1YAL005C PNS1Q12412 539 aa12.05□□□□□ -0.48
SSA1YAL005C YOR343CQ12484 108 aa12.05□□□□□ -0.48
SSA1YAL005C MDH3P32419 343 aaKnown RBP RIP-Chip data12.05□□□□□ -0.48not detected
SSA1YAL005C FET3P38993 636 aa12.05□□□□□ -0.48
SSA1YAL005C NAS2P40555 220 aa12.05□□□□□ -0.48
SSA1YAL005C NQM1P53228 333 aaPredicted RBP12.05□□□□□ -0.48
SSA1YAL005C PBP1P53297 722 aaKnown RBP12.05□□□□□ -0.48
SSA1YAL005C ERV25P54837 211 aaKnown RBP12.05□□□□□ -0.48
SSA1YAL005C NUP49Q02199 472 aa12.05□□□□□ -0.48
SSA1YAL005C YMR087WQ04299 284 aa12.05□□□□□ -0.48
SSA1YAL005C HNT3Q08702 217 aa12.05□□□□□ -0.48
SSA1YAL005C SET6Q12529 373 aa12.05□□□□□ -0.48
SSA1YAL005C MSN4P33749 630 aa12.04□□□□□ -0.48
SSA1YAL005C REE1P40893 198 aa12.04□□□□□ -0.48
SSA1YAL005C MRPL1Q04599 285 aa12.04□□□□□ -0.48
SSA1YAL005C AIM17P23180 465 aaKnown RBP12.03□□□□□ -0.48
SSA1YAL005C YCL002CP25565 263 aa12.03□□□□□ -0.48
SSA1YAL005C MOH1P38191 138 aa12.03□□□□□ -0.48
SSA1YAL005C YHR035WP38769 630 aa12.03□□□□□ -0.48
SSA1YAL005C YJR098CP47139 656 aa12.03□□□□□ -0.48
SSA1YAL005C MRX10Q05648 414 aa12.03□□□□□ -0.48
SSA1YAL005C RSA3Q05942 220 aaKnown RBP12.03□□□□□ -0.48
SSA1YAL005C RDL2Q08742 149 aaKnown RBP12.03□□□□□ -0.48
SSA1YAL005C YLR125WQ12138 136 aa12.03□□□□□ -0.48
SSA1YAL005C RAS1P01119 309 aa12.03□□□□□ -0.48
SSA1YAL005C HIS7P33734 552 aaKnown RBP12.03□□□□□ -0.48
SSA1YAL005C YGL260WP53056 76 aa12.03□□□□□ -0.48
SSA1YAL005C PDR16P53860 351 aaKnown RBP12.03□□□□□ -0.48
SSA1YAL005C UTP21Q06078 939 aaPredicted RBP12.03□□□□□ -0.48
SSA1YAL005C MLC2Q06580 163 aa12.03□□□□□ -0.48
SSA1YAL005C IRC19Q07843 230 aa12.03□□□□□ -0.48
SSA1YAL005C PCL9Q12477 304 aa12.03□□□□□ -0.48
SSA1YAL005C MTR10Q99189 972 aa12.03□□□□□ -0.48
SSA1YAL005C CDC9P04819 755 aa12.02□□□□□ -0.49
SSA1YAL005C PHO80P20052 293 aa12.02□□□□□ -0.49
SSA1YAL005C ADH7P25377 361 aa12.02□□□□□ -0.49
SSA1YAL005C THI4P32318 326 aa12.02□□□□□ -0.49
SSA1YAL005C PAD1P33751 242 aaKnown RBP RIP-Chip data12.02□□□□□ -0.49not detected
SSA1YAL005C CCZ1P38273 704 aa12.02□□□□□ -0.49
SSA1YAL005C SHO1P40073 367 aa12.02□□□□□ -0.49
SSA1YAL005C SNX4P47057 423 aa12.02□□□□□ -0.49
SSA1YAL005C EFM3P47163 339 aa12.02□□□□□ -0.49
SSA1YAL005C COS10P52924 374 aa12.02□□□□□ -0.49
SSA1YAL005C SDC1Q03323 175 aa12.02□□□□□ -0.49
SSA1YAL005C TMS1Q12116 473 aa12.02□□□□□ -0.49
SSA1YAL005C PRP8P33334 2413 aaKnown RBP12.02□□□□□ -0.49
SSA1YAL005C YFR010W-AP0C5N0 62 aa12.01□□□□□ -0.49
SSA1YAL005C YIL169CP40442 995 aa12.01□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms