RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 XPNPEP3Q9NQH7 507 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 IFNKQ9P0W0 207 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 ARMCX3Q9UH62 379 aaPredicted RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 DDX20Q9UHI6 824 aaKnown RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 LRRIQ4A6NIV6 560 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 SFI1A8K8P3 1242 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 ZBTB42B2RXF5 422 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 HNRNPDLO14979 420 aaKnown RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 SLC16A4O15374 487 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 SORBS3O60504 671 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 PRPF6O94906 941 aaKnown RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 C6orf222P0C671 652 aaPredicted RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 ZNF286BP0CG31 522 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 ATP1A3P13637 1013 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 KRT13P13646 458 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 GLRA2P23416 452 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 CNGA1P29973 690 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 HOXC8P31273 242 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 GRK4P32298 578 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 PSEN2P49810 448 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 CASP5P51878 434 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 PURAQ00577 322 aaKnown RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 NCBP1Q09161 790 aaKnown RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 CETN1Q12798 172 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 NR1I3Q14994 352 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 KRT31Q15323 416 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 LRRC41Q15345 812 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 FAM187BQ17R55 369 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 KIAA0753Q2KHM9 967 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 SPECC1LQ69YQ0 1117 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 EFCAB12Q6NXP0 572 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 NFRKBQ6P4R8 1299 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 MTHFD1LQ6UB35 978 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 RSPH3Q86UC2 560 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 TRIM50Q86XT4 487 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 NELFCDQ8IXH7 590 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 ARRDC4Q8NCT1 418 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 HPS3Q969F9 1004 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 MRPL4Q9BYD3 311 aaKnown RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 XPO4Q9C0E2 1151 aaKnown RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 RNPEPQ9H4A4 650 aa11.31□□□□□ -0.6
LINC00598-216ENST00000638163 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 PRMT7Q9NVM4 692 aaPredicted RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 SUCLA2Q9P2R7 463 aaPredicted RBP11.31□□□□□ -0.6
LINC00598-216ENST00000638163 GTPBP10A4D1E9 387 aaKnown RBP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 P4HA2O15460 535 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 TGFB1I1O43294 461 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 CAND2O75155 1236 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 MYL3P08590 195 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 SMIM10L2AP0DMW4 78 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 SMIM10L2BP0DMW5 78 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 KLRC1P26715 233 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 LIG4P49917 911 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 PMS1P54277 932 aaKnown RBP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 MCCD1P59942 119 aaPredicted RBP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 LAMTOR4Q0VGL1 99 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 PKN2Q16513 984 aaKnown RBP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 FIGNQ5HY92 759 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 PRAMEF19Q5SWL8 479 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 MAEAQ7L5Y9 396 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 TRMT1LQ7Z2T5 733 aaKnown RBP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 SRGAP1Q7Z6B7 1085 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 VSTM4Q8IW00 320 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 METTL13Q8N6R0 699 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 LINC01465Q8N7H1 131 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 XXYLT1Q8NBI6 393 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 CCDC112Q8NEF3 446 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 PRPF31Q8WWY3 499 aaKnown RBP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 BICD1Q96G01 975 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 SUGCTQ9HAC7 445 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 GPRC5CQ9NQ84 441 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 DMAC2Q9NW81 257 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00598-216ENST00000638163 STYXL1Q9Y6J8 313 aa11.3□□□□□ -0.6
LINC00598-216ENST00000638163 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 WDR81Q562E7 1941 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 C17orf102A2RUQ5 167 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 PMM2O15305 246 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 ADCY6O43306 1168 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 EXOC3O60645 756 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 ADAMTS4O75173 837 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 TOM1L1O75674 476 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 RFX1P22670 979 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 PTENP60484 403 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 CAPSQ13938 189 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 SURF1Q15526 300 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 VWA3BQ502W6 1294 aa11.29□□□□□ -0.6
LINC00598-216ENST00000638163 ZC2HC1CQ53FD0 456 aaPredicted RBP11.29□□□□□ -0.6
LINC00598-216ENST00000638163 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms