RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 NKX3-2P78367 333 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 HMGN5P82970 282 aaKnown RBP6.42□□□□□ -1.38
CDH8-213ENST00000584966 SP2Q02086 613 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 GUCY1B3Q02153 619 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 DNM1Q05193 864 aaKnown RBP6.42□□□□□ -1.38
CDH8-213ENST00000584966 AP3B2Q13367 1082 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 CCDC144BQ3MJ40 725 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 ARHGEF16Q5VV41 709 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 MFSD14CQ5VZR4 134 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 PCNX4Q63HM2 1172 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 EEPD1Q7L9B9 569 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 FBXO16Q8IX29 292 aaPredicted RBP6.42□□□□□ -1.38
CDH8-213ENST00000584966 REXO1Q8N1G1 1221 aaKnown RBP6.42□□□□□ -1.38
CDH8-213ENST00000584966 CCDC148Q8NFR7 591 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 CYP2W1Q8TAV3 490 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 CCDC12Q8WUD4 166 aaPredicted RBP6.42□□□□□ -1.38
CDH8-213ENST00000584966 WASF1Q92558 559 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 LENG9Q96B70 501 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 ABHD8Q96I13 439 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 MBOAT7Q96N66 472 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 DUSP9Q99956 384 aaKnown RBP6.42□□□□□ -1.38
CDH8-213ENST00000584966 ANO3Q9BYT9 981 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 NIF3L1Q9GZT8 377 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 GLT8D2Q9H1C3 349 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 BCAS3Q9H6U6 928 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 VTA1Q9NP79 307 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 UBIAD1Q9Y5Z9 338 aa6.42□□□□□ -1.38
CDH8-213ENST00000584966 IGLV3-22A0A075B6J6 115 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 CYP3A7-CYP3A51PA0A087WV96 503 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 ZBTB42B2RXF5 422 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 KIF28PB7ZC32 967 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 FAM86B1E9PN63 330 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 MEIS1O00470 390 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 ATP9AO75110 1047 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 FOSP01100 380 aaPredicted RBP6.41□□□□□ -1.38
CDH8-213ENST00000584966 C8AP07357 584 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 GJB1P08034 283 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 FAM86B2P0C5J1 330 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 MYCLP12524 364 aaPredicted RBP6.41□□□□□ -1.38
CDH8-213ENST00000584966 CYP3A7P24462 503 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 U2AF2P26368 475 aaKnown RBP eCLIP6.41□□□□□ -1.38
CDH8-213ENST00000584966 ICAM3P32942 547 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 CIITAP33076 1130 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 ADCYAP1R1P41586 468 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 DAB2P98082 770 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 STXBP2Q15833 593 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 PCSK7Q16549 785 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 IQSEC1Q6DN90 963 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 CCSAPQ6IQ19 270 aaPredicted RBP6.41□□□□□ -1.38
CDH8-213ENST00000584966 XRRA1Q6P2D8 792 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 TREML1Q86YW5 311 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 KLHDC9Q8NEP7 349 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 BICD2Q8TD16 824 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 COPS5Q92905 334 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 C8orf76Q96K31 380 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 INPP4AQ96PE3 977 aaPredicted RBP6.41□□□□□ -1.38
CDH8-213ENST00000584966 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 WDR11Q9BZH6 1224 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.41□□□□□ -1.38
CDH8-213ENST00000584966 SMG9Q9H0W8 520 aaKnown RBP6.41□□□□□ -1.38
CDH8-213ENST00000584966 RNF19AQ9NV58 838 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 RTEL1Q9NZ71 1219 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 DDX41Q9UJV9 622 aaKnown RBP6.41□□□□□ -1.38
CDH8-213ENST00000584966 OGDHLQ9ULD0 1010 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 SMC3Q9UQE7 1217 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 TELO2Q9Y4R8 837 aa6.41□□□□□ -1.38
CDH8-213ENST00000584966 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.41□□□□□ -1.38
CDH8-213ENST00000584966 LAMA2P24043 3122 aaKnown RBP6.41□□□□□ -1.38
CDH8-213ENST00000584966 MYADML2A6NDP7 307 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 SCAMP3O14828 347 aaKnown RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 DHX15O43143 795 aaKnown RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 DUSP11O75319 330 aaKnown RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 STAM2O75886 525 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 SGPL1O95470 568 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 ARP10275 920 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 AKR1A1P14550 325 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 KCNA2P16389 499 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 SYT1P21579 422 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 CCND2P30279 289 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 KRT2P35908 639 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 GJA8P48165 433 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 TOB1P50616 345 aaPredicted RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 USP11P51784 963 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 GJA9P57773 515 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 LY6KQ17RY6 165 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 DUSP28Q4G0W2 176 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 CEP55Q53EZ4 464 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 GJC2Q5T442 439 aaPredicted RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 ANO1Q5XXA6 986 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 MCTP2Q6DN12 878 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 SEPT14Q6ZU15 432 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 UBE2Q1Q7Z7E8 422 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 DTX1Q86Y01 620 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 HSCBQ8IWL3 235 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 DIS3L2Q8IYB7 885 aaKnown RBP6.4□□□□□ -1.38
CDH8-213ENST00000584966 FAM184AQ8NB25 1140 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 TBCKQ8TEA7 893 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 FAM161BQ96MY7 647 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 DEFB118Q96PH6 123 aa6.4□□□□□ -1.38
CDH8-213ENST00000584966 MXRA8Q9BRK3 442 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms