RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SLC39A4Q6P5W5 647 aa15.33■□□□□ 0.04
UBBP4-202ENST00000584755 ZSCAN30Q86W11 494 aa15.33■□□□□ 0.04
UBBP4-202ENST00000584755 RETREG2Q8NC44 543 aa15.33■□□□□ 0.04
UBBP4-202ENST00000584755 CD99L2Q8TCZ2 262 aa15.33■□□□□ 0.04
UBBP4-202ENST00000584755 UPF3AQ9H1J1 476 aaKnown RBP15.33■□□□□ 0.04
UBBP4-202ENST00000584755 PHLPP2Q6ZVD8 1323 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 ASAP2O43150 1006 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 SEPT4O43236 478 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 CNGA1P29973 690 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 ADSSP30520 456 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 EFNA5P52803 228 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 POU5F1BQ06416 359 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 CACNB2Q08289 660 aaPredicted RBP15.32■□□□□ 0.04
UBBP4-202ENST00000584755 PPFIA1Q13136 1202 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 TRIM14Q14142 442 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 MARCH8Q5T0T0 291 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 FKBP15Q5T1M5 1219 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 CEP135Q66GS9 1140 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 EFCAB12Q6NXP0 572 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 LRRC71Q8N4P6 559 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 DEPTORQ8TB45 409 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 ZNF830Q96NB3 372 aaPredicted RBP15.32■□□□□ 0.04
UBBP4-202ENST00000584755 CBWD1Q9BRT8 395 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 NFKBIZQ9BYH8 718 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 CCDC113Q9H0I3 377 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 SUGCTQ9HAC7 445 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 SUCLA2Q9P2R7 463 aaPredicted RBP15.32■□□□□ 0.04
UBBP4-202ENST00000584755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.32■□□□□ 0.04
UBBP4-202ENST00000584755 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.32■□□□□ 0.049e-9■□□□□ 11.2
UBBP4-202ENST00000584755 STYXL1Q9Y6J8 313 aa15.32■□□□□ 0.04
UBBP4-202ENST00000584755 RRN3P2A6NIE6 340 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 TISP43B9A030 160 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 ANKRD63C9JTQ0 380 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 GYPCP04921 128 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 GARTP22102 1010 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 KLRC1P26715 233 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
UBBP4-202ENST00000584755 TRIM32Q13049 653 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 GRIK4Q16099 956 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 FSCN1Q16658 493 aaKnown RBP15.31■□□□□ 0.04
UBBP4-202ENST00000584755 FIGNQ5HY92 759 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 MAP3K21Q5TCX8 1036 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 MTHFD1LQ6UB35 978 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 FAM186BQ8IYM0 893 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 TC2NQ8N9U0 490 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 HSPBP1Q9NZL4 362 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 SIK3Q9Y2K2 1263 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 FRMD4BQ9Y2L6 1034 aa15.31■□□□□ 0.04
UBBP4-202ENST00000584755 K7ERI5 159 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 PES1O00541 588 aaKnown RBP15.3■□□□□ 0.04
UBBP4-202ENST00000584755 EXOC3O60645 756 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 KPNA6O60684 536 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 SFPQP23246 707 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBBP4-202ENST00000584755 CYP2J2P51589 502 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 CCZ1BP86790 482 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 CCZ1P86791 482 aaPredicted RBP15.3■□□□□ 0.04
UBBP4-202ENST00000584755 LRMPQ12912 555 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 STRN3Q13033 797 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 SYCP1Q15431 976 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
UBBP4-202ENST00000584755 XXYLT1Q8NBI6 393 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 PXYLP1Q8TE99 480 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 SLC35C1Q96A29 364 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 IQCDQ96DY2 449 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 FBXL18Q96ME1 805 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 TTYH3Q9C0H2 523 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 C2orf40Q9H1Z8 148 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 TMX1Q9H3N1 280 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 NRCAMQ92823 1304 aa15.3■□□□□ 0.04
UBBP4-202ENST00000584755 MBLAC1A4D2B0 266 aaPredicted RBP15.29■□□□□ 0.04
UBBP4-202ENST00000584755 ESPNB1AK53 854 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 HNRNPDLO14979 420 aaKnown RBP15.29■□□□□ 0.04
UBBP4-202ENST00000584755 MSCO60682 206 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 FKTNO75072 461 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 HMGCRP04035 888 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 HOXC8P31273 242 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 PSEN2P49810 448 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 CLCN3P51790 818 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 PTENP60484 403 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 IGBP1P78318 339 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 ADAM17P78536 824 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 PURAQ00577 322 aaKnown RBP15.29■□□□□ 0.04
UBBP4-202ENST00000584755 BEX3Q00994 111 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 RBL2Q08999 1139 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 KCNH2Q12809 1159 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 TFDP1Q14186 410 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 MFSD10Q14728 455 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 KIAA0753Q2KHM9 967 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 PPFIBP1Q86W92 1011 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 RNF149Q8NC42 400 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 NUP58Q9BVL2 599 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 KATNAL1Q9BW62 490 aa15.29■□□□□ 0.04
UBBP4-202ENST00000584755 AKR1B15C9JRZ8 316 aaPredicted RBP15.28■□□□□ 0.04
UBBP4-202ENST00000584755 KIAA0391O15091 583 aaKnown RBP15.28■□□□□ 0.04
UBBP4-202ENST00000584755 MFAP3LO75121 409 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 ADAMTS4O75173 837 aa15.28■□□□□ 0.04
UBBP4-202ENST00000584755 AFPP02771 609 aaKnown RBP15.28■□□□□ 0.04
UBBP4-202ENST00000584755 EDN1P05305 212 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms