RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 RNF217Q8TC41 542 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 RAPGEF5Q92565 580 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 TEX12Q9BXU0 123 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 BATF3Q9NR55 127 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 FNDC3AQ9Y2H6 1198 aaKnown RBP15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 TCP11X1B4DZS4 312 aa15.46■□□□□ 0.06
CSNK1D-217ENST00000581241 FOXP2O15409 715 aa15.46■□□□□ 0.06
CSNK1D-217ENST00000581241 FGFR4P22455 802 aa15.46■□□□□ 0.06
CSNK1D-217ENST00000581241 PGM1P36871 562 aa15.46■□□□□ 0.06
CSNK1D-217ENST00000581241 VAMP7P51809 220 aa15.46■□□□□ 0.06
CSNK1D-217ENST00000581241 FSD1LQ9BXM9 530 aa15.46■□□□□ 0.06
CSNK1D-217ENST00000581241 HADHAP40939 763 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 RASGRF1Q13972 1273 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 DRAP1Q14919 205 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 PPP6R3Q5H9R7 873 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.45■□□□□ 0.061e-8■■■■■ 49.8
CSNK1D-217ENST00000581241 ANKRD7Q92527 254 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 SEPT8Q92599 483 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 DCPSQ96C86 337 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 NAF1Q96HR8 494 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 WDR24Q96S15 920 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 CLRN2A0PK11 232 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 K7ERI5 159 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 CIITAP33076 1130 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 KCNJ6P48051 423 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 SNAP25P60880 206 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 NLRP10Q86W26 655 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 CDKL3Q8IVW4 592 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 XXYLT1Q8NBI6 393 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 SPATA4Q8NEY3 305 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 PIGOQ8TEQ8 1089 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 RNF25Q96BH1 459 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 LRRC1Q9BTT6 524 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 WWP1Q9H0M0 922 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 NGRNQ9NPE2 291 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 GJB4Q9NTQ9 266 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 hCG_2014768A0A024R1R8 64 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 POTEMA6NI47 508 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 FTLP02792 175 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 ZSCAN20P17040 1043 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 TBXAS1P24557 533 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 IMPG1Q17R60 797 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 LRRC8EQ6NSJ5 796 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 CYP4F11Q9HBI6 524 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 EML4Q9HC35 981 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 HPCAL4Q9UM19 191 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 PPP1R37O75864 691 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 CHN1P15882 459 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 MCAMP43121 646 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 PRPF38AQ8NAV1 312 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 ARL8AQ96BM9 186 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 ALKBH8Q96BT7 664 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 PI4KBQ9UBF8 816 aa15.45■□□□□ 0.06
CSNK1D-217ENST00000581241 HNRNPCP07910 306 aaKnown RBP eCLIP15.44■□□□□ 0.062e-7■■□□□ 13.4
CSNK1D-217ENST00000581241 GCLMP48507 274 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 TNFAIP2Q03169 654 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 AGBL2Q5U5Z8 902 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 RFX8Q6ZV50 586 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 RHOT1Q8IXI2 618 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 MB21D2Q8IYB1 491 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 AGGF1Q8N302 714 aaeCLIP15.44■□□□□ 0.065e-8■■■■■ 114.4
CSNK1D-217ENST00000581241 OR6B3Q8NGW1 331 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 HEY1Q9Y5J3 304 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 ZFYVE16Q7Z3T8 1539 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 CCNA1P78396 465 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 NBPF20Q3BBV1 942 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 NAALADL2Q58DX5 795 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 ABI1Q8IZP0 508 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 STAG2Q8N3U4 1231 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 RFFLQ8WZ73 363 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 IFT43Q96FT9 208 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 ERVV-1B6SEH8 477 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 IFNA8P32881 189 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 GPC3P51654 580 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 RBBP7Q16576 425 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 ZNF699Q32M78 642 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 EAPPQ56P03 285 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 PDXDC2PQ6P474 469 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 PALMDQ9NP74 551 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 SNX12Q9UMY4 172 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 KAT6BQ8WYB5 2073 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 E9PMD0 336 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 CCZ1BP86790 482 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 CCZ1P86791 482 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 CNKSR1Q969H4 720 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 SLC13A1Q9BZW2 595 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 AP5M1Q9H0R1 490 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 SENP1Q9P0U3 644 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 KDM6BO15054 1643 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 ITIH6Q6UXX5 1313 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 HEG1Q9ULI3 1381 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 PIK3R2O00459 728 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 KRT7P08729 469 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 IL10P22301 178 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 TMEM270Q6UE05 265 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 OR9Q1Q8NGQ5 310 aa15.44■□□□□ 0.06
CSNK1D-217ENST00000581241 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 SERPINB10P48595 397 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 SIK1P57059 783 aa15.43■□□□□ 0.06
CSNK1D-217ENST00000581241 FBXW10Q5XX13 1052 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms