RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 GTF2A1LQ9UNN4 478 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 ANKRD6Q9Y2G4 727 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 A0A1W2PQU0 124 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 TCRBV5S2A0A599 114 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 CFAP69A5D8W1 941 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 GABRDO14764 452 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 PRPF3O43395 683 aaKnown RBP3.84□□□□□ -1.79
KPNB1-208ENST00000580019 ZNF500O60304 480 aaPredicted RBP3.84□□□□□ -1.79
KPNB1-208ENST00000580019 EFCAB14O75071 495 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 VAMP4O75379 141 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 SNUPNO95149 360 aaKnown RBP3.84□□□□□ -1.79
KPNB1-208ENST00000580019 ASLP04424 464 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 PYGMP11217 842 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 SCNN1BP51168 640 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 NEK3P51956 506 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 TMPRSS15P98073 1019 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 FAPQ12884 760 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 CRHR2Q13324 411 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 TCIRG1Q13488 830 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 GTF2H3Q13889 308 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 SAFBQ15424 915 aaKnown RBP eCLIP3.84□□□□□ -1.79
KPNB1-208ENST00000580019 GNPTABQ3T906 1256 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 ALFQ53S48 1182 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 ZMAT1Q5H9K5 638 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 PHF19Q5T6S3 580 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 ANO1Q5XXA6 986 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 LHFPL2Q6ZUX7 228 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 UBE2R2Q712K3 238 aaPredicted RBP3.84□□□□□ -1.79
KPNB1-208ENST00000580019 RD3Q7Z3Z2 195 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 MRGPREQ86SM8 312 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 MORC1Q86VD1 984 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 DTX3Q8N9I9 347 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 TTC17Q96AE7 1141 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 SCLT1Q96NL6 688 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 STRBPQ96SI9 672 aaKnown RBP3.84□□□□□ -1.79
KPNB1-208ENST00000580019 MMP19Q99542 508 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 PLA2G3Q9NZ20 509 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 HSPBP1Q9NZL4 362 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 LRP2BPQ9P2M1 347 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 PNMA8BQ9ULN7 279 aaPredicted RBP3.84□□□□□ -1.79
KPNB1-208ENST00000580019 NR2E1Q9Y466 385 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 PCDHB4Q9Y5E5 795 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 TNKSO95271 1327 aa3.84□□□□□ -1.79
KPNB1-208ENST00000580019 SYNJ2O15056 1496 aa3.84□□□□□ -1.8
KPNB1-208ENST00000580019 DCAF1Q9Y4B6 1507 aa3.84□□□□□ -1.8
KPNB1-208ENST00000580019 CAPN14A8MX76 684 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 CCER2I3L3R5 266 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 HGSO14964 777 aaPredicted RBP3.83□□□□□ -1.8
KPNB1-208ENST00000580019 ERC2O15083 957 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 OPA1O60313 960 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 DNAJC8O75937 253 aaPredicted RBP3.83□□□□□ -1.8
KPNB1-208ENST00000580019 CYP2C19P33261 490 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 SLC25A3Q00325 362 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 AMPD2Q01433 879 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 RRP1BQ14684 758 aaKnown RBP3.83□□□□□ -1.8
KPNB1-208ENST00000580019 SART3Q15020 963 aaKnown RBP3.83□□□□□ -1.8
KPNB1-208ENST00000580019 PCOLCEQ15113 449 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 PCBP1Q15365 356 aaKnown RBP eCLIP3.83□□□□□ -1.8
KPNB1-208ENST00000580019 PTPN21Q16825 1174 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 COBLL1Q53SF7 1204 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 TRIM61Q5EBN2 209 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 MBLAC2Q68D91 279 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 VASNQ6EMK4 673 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 ERAP2Q6P179 960 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 ADGRE4PQ86SQ3 457 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 OR2W6PQ8NHA6 318 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 SMG7Q92540 1137 aaKnown RBP3.83□□□□□ -1.8
KPNB1-208ENST00000580019 HAS1Q92839 578 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 TNIP3Q96KP6 325 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 CDC5LQ99459 802 aaKnown RBP3.83□□□□□ -1.8
KPNB1-208ENST00000580019 TCF7L1Q9HCS4 588 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 MAN1C1Q9NR34 630 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 ARHGEF4Q9NR80 690 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 NRBP1Q9UHY1 535 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 PCDHB10Q9UN67 800 aa3.83□□□□□ -1.8
KPNB1-208ENST00000580019 LUC7L2Q9Y383 392 aaKnown RBP3.83□□□□□ -1.8
KPNB1-208ENST00000580019 BAZ1BQ9UIG0 1483 aaKnown RBP3.82□□□□□ -1.8
KPNB1-208ENST00000580019 CEP164Q9UPV0 1460 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 ANKRD34BA5PLL1 514 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 B4E1Z4 1266 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 MATN2O00339 956 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 CKMP06732 381 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 LDHCP07864 332 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 FGFR1P11362 822 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 VCAM1P19320 739 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 FPR2P25090 351 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 HALP42357 657 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 GABREP78334 506 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 GBX1Q14549 363 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 KRT72Q14CN4 511 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 ZYXQ15942 572 aaKnown RBP3.82□□□□□ -1.8
KPNB1-208ENST00000580019 CFAP100Q494V2 611 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 ARHGAP29Q52LW3 1261 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 NSMFQ6X4W1 530 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 TOGARAM2Q6ZUX3 1019 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 VRK3Q8IV63 474 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 TPH2Q8IWU9 490 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 ZNF366Q8N895 744 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 ADCY4Q8NFM4 1077 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 GJA10Q969M2 543 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms