RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 A8MXQ7 604 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 ZNF18P17022 549 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 POLR2FP61218 127 aaKnown RBP12.54□□□□□ -0.4
CSRP1-215ENST00000532313 ST8SIA6P61647 398 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 ATP2C1P98194 919 aaPredicted RBP12.54□□□□□ -0.4
CSRP1-215ENST00000532313 SPECC1LQ69YQ0 1117 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 CD99L2Q8TCZ2 262 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 RSAD2Q8WXG1 361 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 DEFB118Q96PH6 123 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 DYRK4Q9NR20 520 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 TRMT1Q9NXH9 659 aaKnown RBP12.54□□□□□ -0.4
CSRP1-215ENST00000532313 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 RWDD3Q9Y3V2 267 aa12.54□□□□□ -0.4
CSRP1-215ENST00000532313 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
CSRP1-215ENST00000532313 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 ODC1P11926 461 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 POTEGQ6S5H5 508 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 PPP1R12CQ9BZL4 782 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 TRPV2Q9Y5S1 764 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 A0A1W2PRG0 241 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 E9PMD0 336 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 NDUFA8P51970 172 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 ZNF410Q86VK4 478 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 CERS5Q8N5B7 392 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 MAP3K7O43318 606 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 SLC12A2P55011 1212 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
CSRP1-215ENST00000532313 CCT6BQ92526 530 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 GCNT4Q9P109 453 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 NR3C1P04150 777 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 LMNB2Q03252 620 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 KRT39Q6A163 491 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 ANKS1AQ92625 1134 aa12.53□□□□□ -0.4
CSRP1-215ENST00000532313 DDX4Q9NQI0 724 aaKnown RBP12.53□□□□□ -0.4
CSRP1-215ENST00000532313 KLRG2A4D1S0 409 aaPredicted RBP12.52□□□□□ -0.4
CSRP1-215ENST00000532313 BTBD19C9JJ37 291 aa12.52□□□□□ -0.4
CSRP1-215ENST00000532313 CD58P19256 250 aa12.52□□□□□ -0.4
CSRP1-215ENST00000532313 RPA1P27694 616 aa12.52□□□□□ -0.4
CSRP1-215ENST00000532313 USP38Q8NB14 1042 aa12.52□□□□□ -0.4
CSRP1-215ENST00000532313 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.4
CSRP1-215ENST00000532313 PRPSAP2O60256 369 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 ALDH3A1P30838 453 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 FAM193AP78312 1265 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 LRRC41Q15345 812 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 RPS6KA1Q15418 735 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 C10orf76Q5T2E6 689 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 ERICH1Q86X53 443 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 AFAP1L2Q8N4X5 818 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 RIOX1Q9H6W3 641 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 CYP26B1Q9NR63 512 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 LTBP4Q8N2S1 1624 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 SYNJ2BP-COX16A0A087WUM0 186 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 TMC7Q7Z402 723 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 ITIH5Q86UX2 942 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 COX16Q9P0S2 106 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 ANAPC5Q9UJX4 755 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 PCDHA5Q9Y5H7 936 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 GOLGA8IPA6NC78 632 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 GOLGA8JA6NMD2 632 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 XYLBO75191 536 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 USP2O75604 605 aaPredicted RBP12.52□□□□□ -0.41
CSRP1-215ENST00000532313 ALDH2P05091 517 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 RHBDL3P58872 404 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 RPL10AP62906 217 aaKnown RBP12.52□□□□□ -0.41
CSRP1-215ENST00000532313 RESTQ13127 1097 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 PDCL2Q8N4E4 241 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 RAB3IL1Q8TBN0 382 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 TMEM143Q96AN5 459 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 PAGE5Q96GU1 130 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 RUNDC3BQ96NL0 473 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 AIFM3Q96NN9 605 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 SLITRK1Q96PX8 696 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 RANBP17Q9H2T7 1088 aaKnown RBP12.52□□□□□ -0.41
CSRP1-215ENST00000532313 IPPQ9Y573 584 aa12.52□□□□□ -0.41
CSRP1-215ENST00000532313 CALB1P05937 261 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 COASYQ13057 564 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 GRIK4Q16099 956 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 TRIM72Q6ZMU5 477 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 CCDC186Q7Z3E2 898 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 IFIH1Q9BYX4 1025 aaKnown RBP12.51□□□□□ -0.41
CSRP1-215ENST00000532313 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
CSRP1-215ENST00000532313 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
CSRP1-215ENST00000532313 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
CSRP1-215ENST00000532313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSRP1-215ENST00000532313 NRCAMQ92823 1304 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 TLR2O60603 784 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 IVLP07476 585 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 PPM1AP35813 382 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 EPHB1P54762 984 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 CYP27A1Q02318 531 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 ITIH3Q06033 890 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 CES5AQ6NT32 575 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 SCARA5Q6ZMJ2 495 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms