RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 RNF216Q9NWF9 866 aaPredicted RBP19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 DACT1Q9NYF0 836 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 MUTYHQ9UIF7 546 aa19.43■□□□□ 0.7
ECHDC1-216ENST00000479525 TBX3O15119 743 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 HOXA2O43364 376 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 MCM7P33993 719 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 BCAR1P56945 870 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 TRIM29Q14134 588 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 DUSP6Q16828 381 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 ERICH6BQ5W0A0 696 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 MAEAQ7L5Y9 396 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 TMC7Q7Z402 723 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 SLC39A11Q8N1S5 342 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 RNF149Q8NC42 400 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 PIGOQ8TEQ8 1089 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 PSPC1Q8WXF1 523 aaKnown RBP19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 CPB2Q96IY4 423 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 DNAJB4Q9UDY4 337 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 FAM50BQ9Y247 325 aa19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 USP15Q9Y4E8 981 aaPredicted RBP19.42■□□□□ 0.7
ECHDC1-216ENST00000479525 NEMFO60524 1076 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 UBE3AQ05086 875 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 SLFN12Q8IYM2 578 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 SMRP1Q8NCR6 262 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 FEZF2Q8TBJ5 459 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 ASAP3Q8TDY4 903 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 MTRQ99707 1265 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 NAP1L4Q99733 375 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 ZSWIM4Q9H7M6 989 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 NRDE2Q9H7Z3 1164 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 SPG21Q9NZD8 308 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 PCDHA12Q9UN75 941 aa19.41■□□□□ 0.7
ECHDC1-216ENST00000479525 C19orf67A6NJJ6 358 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 EOMESO95936 686 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 TECP42680 631 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 PLCB3Q01970 1234 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 NBR1Q14596 966 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 AGMOQ6ZNB7 445 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 FERMT3Q86UX7 667 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 CDR2LQ86X02 465 aaPredicted RBP19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 ZNF280BQ86YH2 543 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 JPH2Q9BR39 696 aaPredicted RBP19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 AGPAT5Q9NUQ2 364 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 TBC1D13Q9NVG8 400 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 PCDHB2Q9Y5E7 798 aa19.4■□□□□ 0.7
ECHDC1-216ENST00000479525 DKC1O60832 514 aaKnown RBP eCLIP19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 OFD1O75665 1012 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 RFC5P40937 340 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 ZNF174Q15697 407 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 C8orf34Q49A92 452 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 UBXN11Q5T124 520 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 KANK3Q6NY19 840 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 ZNF710Q8N1W2 664 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 EIF2AQ9BY44 585 aaKnown RBP19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 INO80BQ9C086 356 aaPredicted RBP19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 CHST12Q9NRB3 414 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 PRKAG3Q9UGI9 489 aa19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 PUF60Q9UHX1 559 aaKnown RBP19.39■□□□□ 0.69
ECHDC1-216ENST00000479525 PLXNA3P51805 1871 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 DCXO43602 365 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 USO1O60763 962 aaKnown RBP19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 GPR37L1O60883 481 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 EYA4O95677 639 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 WEE2P0C1S8 567 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 HOXA11P31270 313 aaPredicted RBP19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 RNASELQ05823 741 aaKnown RBP19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 COASYQ13057 564 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 CSPP1Q1MSJ5 1256 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 NOMO2Q5JPE7 1267 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 OTUD6AQ7L8S5 288 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 RNF135Q8IUD6 432 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 C8orf76Q96K31 380 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 RPGRIP1Q96KN7 1286 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 MTMR9Q96QG7 549 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 KIF2CQ99661 725 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 APOL6Q9BWW8 343 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 RNF39Q9H2S5 420 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 POLD4Q9HCU8 107 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 GPRC5CQ9NQ84 441 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 HES2Q9Y543 173 aa19.38■□□□□ 0.69
ECHDC1-216ENST00000479525 MED24O75448 989 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 DDHD2O94830 711 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 POMCP01189 267 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 SSBP05455 408 aaKnown RBP eCLIP19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 SLC11A1P49279 550 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 CDC42EP1Q00587 391 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 KRT17Q04695 432 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 CAPSQ13938 189 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 GLB1LQ6UWU2 654 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 VPS52Q8N1B4 723 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 HSD17B14Q9BPX1 270 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 MRPL9Q9BYD2 267 aaKnown RBP19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 LZTS1Q9Y250 596 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 C2orf16Q68DN1 1984 aa19.37■□□□□ 0.69
ECHDC1-216ENST00000479525 C2orf71A6NGG8 1288 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 INO80B-WBP1J3KQ70 363 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 B4GALT5O43286 388 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 CXCL14O95715 111 aa19.36■□□□□ 0.69
ECHDC1-216ENST00000479525 PPM1AP35813 382 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms