RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 PRRX2Q99811 253 aa11.36□□□□□ -0.59
SCAMP3-205ENST00000472397 APOL6Q9BWW8 343 aa11.36□□□□□ -0.59
SCAMP3-205ENST00000472397 PLXNA3P51805 1871 aa11.36□□□□□ -0.59
SCAMP3-205ENST00000472397 A0A087WWV3 80 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 ESYT2A0FGR8 921 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 EML1O00423 815 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 CDC45O75419 566 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 EOMESO95936 686 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 CFHP08603 1231 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 CTSAP10619 480 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 GNA11P29992 359 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 KRT32Q14532 448 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 NTRK3Q16288 839 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 GLB1LQ6UWU2 654 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 CCDC12Q8WUD4 166 aaPredicted RBP11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 B3GALT6Q96L58 329 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 CEP89Q96ST8 783 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 SLKQ9H2G2 1235 aaPredicted RBP11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 GJB4Q9NTQ9 266 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 FAM105AQ9NUU6 356 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 DACT1Q9NYF0 836 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 KCNJ14Q9UNX9 436 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 PCDHB2Q9Y5E7 798 aa11.35□□□□□ -0.59
SCAMP3-205ENST00000472397 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 ZBTB39O15060 712 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 SLC37A4O43826 429 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 PSMD10O75832 226 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 CNPP09543 421 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 PDIA3P30101 505 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 JAK3P52333 1124 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 AK2P54819 239 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 ITIH3Q06033 890 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 PTPN14Q15678 1187 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 CWF19L1Q69YN2 538 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 KIAA1841Q6NSI8 718 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 AGMOQ6ZNB7 445 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 DDX53Q86TM3 631 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 UBALD2Q8IYN6 164 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 RIN2Q8WYP3 895 aaPredicted RBP11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 NECTIN4Q96NY8 510 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 MRPL9Q9BYD2 267 aaKnown RBP11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 RNF39Q9H2S5 420 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 MINDY3Q9H8M7 445 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 WRAP73Q9P2S5 460 aaPredicted RBP11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 CACNG4Q9UBN1 327 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 CA14Q9ULX7 337 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 HES2Q9Y543 173 aa11.34□□□□□ -0.59
SCAMP3-205ENST00000472397 FSD2A1L4K1 749 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 PRR23AA6NEV1 266 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 RFPL2O75678 378 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 NPR3P17342 541 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 RPS6KB1P23443 525 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 GBP2P32456 591 aaPredicted RBP11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 OR1G1P47890 313 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 DNM2P50570 870 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 FOSBP53539 338 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 INF2Q27J81 1249 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 LETM2Q2VYF4 491 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 XKR3Q5GH77 459 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 SPECC1Q5M775 1068 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 UBXN11Q5T124 520 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 ANO5Q75V66 913 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 CDR2LQ86X02 465 aaPredicted RBP11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 PALB2Q86YC2 1186 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 ZDHHC14Q8IZN3 488 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 ADSSL1Q8N142 457 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 SIX5Q8N196 739 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 BICD2Q8TD16 824 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 PRPF31Q8WWY3 499 aaKnown RBP11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 CPB2Q96IY4 423 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 FAM193BQ96PV7 902 aaPredicted RBP11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 RIT2Q99578 217 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 NIFKQ9BYG3 293 aaKnown RBP11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 CYP26B1Q9NR63 512 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 MIOSQ9NXC5 875 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 FAN1Q9Y2M0 1017 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 WDR81Q562E7 1941 aa11.33□□□□□ -0.6
SCAMP3-205ENST00000472397 NRP1O14786 923 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 N4BP1O75113 896 aaKnown RBP11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 MAFO75444 373 aaPredicted RBP11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 RPL17P18621 184 aaKnown RBP11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 SFNP31947 248 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 CLCN4P51793 760 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 NCAPH2Q6IBW4 605 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 CCDC149Q6ZUS6 474 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 GPR149Q86SP6 731 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 CCDC148Q8NFR7 591 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 URGCPQ8TCY9 931 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 KCNG4Q8TDN1 519 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms