RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 FRMPD4Q14CM0 1322 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 GOLGA6BA6NDN3 693 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 A6NNZ2 444 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 ZNF263O14978 683 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 CHMP2AO43633 222 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 HSF2BPO75031 334 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 PALMO75781 387 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 PRPF6O94906 941 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 VIL1P09327 827 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 MYBP10242 640 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 UCHL3P15374 230 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 ERCC3P19447 782 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 TNFRSF8P28908 595 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 CHRNA5P30532 468 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 NOP2P46087 812 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 LMAN1P49257 510 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 AARSP49588 968 aaKnown RBP eCLIP8.71□□□□□ -1.023e-49■■■■■ 252.4
SMC4-212ENST00000470240 PAK2Q13177 524 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 CTTNQ14247 550 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 MYBPC2Q14324 1141 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 RPS6KA1Q15418 735 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 ENOX2Q16206 610 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 TUBB8Q3ZCM7 444 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 INTS6LQ5JSJ4 861 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 C6orf118Q5T5N4 469 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 KLHDC7AQ5VTJ3 777 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 RINT1Q6NUQ1 792 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 CCNI2Q6ZMN8 369 aaPredicted RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 NIPA1Q7RTP0 329 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 MIER3Q7Z3K6 550 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 SIAH1Q8IUQ4 282 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 TTLL6Q8N841 843 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 AGBL3Q8NEM8 1001 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 SPATA4Q8NEY3 305 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 AFAP1L1Q8TED9 768 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 COG1Q8WTW3 980 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.71□□□□□ -1.021e-8■■■■■ 268.2
SMC4-212ENST00000470240 LENG9Q96B70 501 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 DYDC2Q96IM9 177 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 PRMT6Q96LA8 375 aaPredicted RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 IWS1Q96ST2 819 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 PSMD1Q99460 953 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 TMEM206Q9H813 350 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 MAP3K20Q9NYL2 800 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 STIM2Q9P246 746 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 LARSQ9P2J5 1176 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 CCPG1Q9ULG6 757 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 TFR2Q9UP52 801 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 DUSP10Q9Y6W6 482 aa8.71□□□□□ -1.02
SMC4-212ENST00000470240 TNS1Q9HBL0 1735 aaKnown RBP8.71□□□□□ -1.02
SMC4-212ENST00000470240 IGLV3-22A0A075B6J6 115 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 A0A0A6YYK5 440 aaPredicted RBP8.7□□□□□ -1.02
SMC4-212ENST00000470240 CLRN2A0PK11 232 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 GOLGA8KD6RF30 607 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 ZNF185O15231 689 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 BUB1O43683 1085 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 PSMD10O75832 226 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 NOL4O94818 638 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 ICAM1P05362 532 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 H2AFZP0C0S5 128 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 FBXO45P0C2W1 286 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 MAPTP10636 758 aaKnown RBP8.7□□□□□ -1.02
SMC4-212ENST00000470240 BCRP11274 1271 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 RXRBP28702 533 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 MATR3P43243 847 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMC4-212ENST00000470240 MYL7Q01449 175 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 PPFIA1Q13136 1202 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 ODR4Q5SWX8 454 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 ALS2CLQ60I27 953 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 HGSNATQ68CP4 663 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 NFRKBQ6P4R8 1299 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 H2AFVQ71UI9 128 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 OTOP1Q7RTM1 612 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 USP37Q86T82 979 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 CREG2Q8IUH2 290 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 LPAR1Q92633 364 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 UIMC1Q96RL1 719 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 RUSC1Q9BVN2 902 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 ADAM21Q9UKJ8 722 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 EXOC7Q9UPT5 735 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 PCDHGC5Q9Y5F6 944 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 PCDHAC2Q9Y5I4 1007 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 ASTN1O14525 1302 aa8.7□□□□□ -1.02
SMC4-212ENST00000470240 RBBP6Q7Z6E9 1792 aaKnown RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 A0A1W2PRG0 241 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 H3BQF6 201 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 K7ENM7 598 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 IPO5O00410 1097 aaKnown RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 EML1O00423 815 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 WDR46O15213 610 aaKnown RBP8.69□□□□□ -1.02
SMC4-212ENST00000470240 C21orf2O43822 256 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 EXOC3O60645 756 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 DKC1O60832 514 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMC4-212ENST00000470240 AKAP3O75969 853 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 BMP2P12643 396 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 PON1P27169 355 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 CAP2P40123 477 aa8.69□□□□□ -1.02
SMC4-212ENST00000470240 PRKCIP41743 596 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms