RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 EPN2O95208 641 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 GALTP07902 379 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 SYNE3Q6ZMZ3 975 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 TBC1D10CQ8IV04 446 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 KCNG1Q9UIX4 513 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 FAN1Q9Y2M0 1017 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 IGKV6-21A0A0C4DH24 114 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 SDSP20132 328 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 FSHRP23945 695 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 HOXD12P35452 270 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 USP11P51784 963 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 PLCB2Q00722 1185 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 USP41Q3LFD5 358 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 SPDYCQ5MJ68 293 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 SPEM1Q8N4L4 309 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 CHST7Q9NS84 486 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 SPATA6Q9NWH7 488 aaPredicted RBP6.43□□□□□ -1.38
CXXC4-202ENST00000466963 PCDHA6Q9UN73 950 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 NEUROG3Q9Y4Z2 214 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 PCDHA8Q9Y5H6 950 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 NEDD4P46934 1319 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 ARHGEF37A1IGU5 675 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 TDGF1P13385 188 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 GNA11P29992 359 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
CXXC4-202ENST00000466963 XKR3Q5GH77 459 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 KIAA2013Q8IYS2 634 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 PANK1Q8TE04 598 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 TBC1D5Q92609 795 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 IRF7Q92985 503 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 CHAMP1Q96JM3 812 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 PCYT2Q99447 389 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 SH3GLB2Q9NR46 395 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 KCNH7Q9NS40 1196 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 RCAN3Q9UKA8 241 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 BACE2Q9Y5Z0 518 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 ZNF806P0C7X5 589 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 GPC3P51654 580 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 E2F5Q15329 346 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 PAN2Q504Q3 1202 aaKnown RBP6.43□□□□□ -1.38
CXXC4-202ENST00000466963 CASC1Q6TDU7 716 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 RBM23Q86U06 439 aaKnown RBP6.43□□□□□ -1.38
CXXC4-202ENST00000466963 SGMS1Q86VZ5 419 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 CAMKK1Q8N5S9 505 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 CCDC148Q8NFR7 591 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 IL31RAQ8NI17 732 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 SMG7Q92540 1137 aaKnown RBP6.43□□□□□ -1.38
CXXC4-202ENST00000466963 ZC3H10Q96K80 434 aaKnown RBP6.43□□□□□ -1.38
CXXC4-202ENST00000466963 PIGSQ96S52 555 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 MYL10Q9BUA6 226 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 NT5C3AQ9H0P0 336 aa6.43□□□□□ -1.38
CXXC4-202ENST00000466963 TRANK1O15050 2925 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 IFIT3O14879 490 aaKnown RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 PPP1R11O60927 126 aaPredicted RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 ADCY1Q08828 1119 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 NFX1Q12986 1120 aaKnown RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 GRIK3Q13003 919 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 BYSLQ13895 437 aaKnown RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 TFDP1Q14186 410 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 HSF5Q4G112 596 aaPredicted RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 SLC44A4Q53GD3 710 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 LIN9Q5TKA1 542 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 LILRA6Q6PI73 481 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 FCHSD1Q86WN1 690 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 PIK3R5Q8WYR1 880 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 PHF20Q9BVI0 1012 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 VPS45Q9NRW7 570 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 FBXW11Q9UKB1 542 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 STK24Q9Y6E0 443 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 EPB41L2O43491 1005 aaKnown RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 RHOBTB1O94844 696 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 OATP04181 439 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 HMGB1P09429 215 aaKnown RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 ITGB5P18084 799 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 GBP2P32456 591 aaPredicted RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 ADCY7P51828 1080 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 NMIQ13287 307 aaPredicted RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 PRR23CQ6ZRP0 262 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 ZNF280BQ86YH2 543 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 PRIMPOLQ96LW4 560 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 APOL6Q9BWW8 343 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 FAM49AQ9H0Q0 323 aaPredicted RBP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 PIDD1Q9HB75 910 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 USP18Q9UMW8 372 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 TNNQ9UQP3 1299 aa6.42□□□□□ -1.38
CXXC4-202ENST00000466963 SF3B1O75533 1304 aaKnown RBP eCLIP6.42□□□□□ -1.38
CXXC4-202ENST00000466963 HIDE1A8MVS5 230 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 TRAPPC3O43617 180 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 ZNF862O60290 1169 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 OFD1O75665 1012 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 RNASELQ05823 741 aaKnown RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 DSC1Q08554 894 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 MXD4Q14582 209 aaPredicted RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 TARBP2Q15633 366 aaKnown RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 PPM1JQ5JR12 505 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 CLLU1OSQ5K130 101 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 TPGS2Q68CL5 300 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 LRRC55Q6ZSA7 311 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 FBXL16Q8N461 479 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 RWDD1Q9H446 243 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms