RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 HAS1Q92839 578 aa16.77■□□□□ 0.27
SNED1-208ENST00000466618 SGSM3Q96HU1 749 aa16.77■□□□□ 0.27
SNED1-208ENST00000466618 NHEJ1Q9H9Q4 299 aaPredicted RBP16.77■□□□□ 0.27
SNED1-208ENST00000466618 KCNH7Q9NS40 1196 aa16.77■□□□□ 0.27
SNED1-208ENST00000466618 EHD2Q9NZN4 543 aa16.77■□□□□ 0.27
SNED1-208ENST00000466618 CAPN6Q9Y6Q1 641 aa16.77■□□□□ 0.27
SNED1-208ENST00000466618 MYH7BA7E2Y1 1941 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 ZNFX1Q9P2E3 1918 aaKnown RBP16.76■□□□□ 0.27
SNED1-208ENST00000466618 SPATA31C2B4DYI2 1134 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 TBX3O15119 743 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 MSH4O15457 936 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNED1-208ENST00000466618 MTMR1Q13613 665 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 TAPT1Q6NXT6 567 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 FMNL3Q8IVF7 1028 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 CD302Q8IX05 232 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 CYFIP2Q96F07 1278 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 CCDC114Q96M63 670 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 OSBPL7Q9BZF2 842 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 TTYH3Q9C0H2 523 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 LRRC37A2A6NM11 1700 aa16.76■□□□□ 0.27
SNED1-208ENST00000466618 RBM47A0AV96 593 aaKnown RBP16.75■□□□□ 0.27
SNED1-208ENST00000466618 DNM1LO00429 736 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 LAD1O00515 517 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 PRLRP16471 622 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 CLNS1AP54105 237 aaKnown RBP16.75■□□□□ 0.27
SNED1-208ENST00000466618 GNPTABQ3T906 1256 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 NLRX1Q86UT6 975 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 MTRQ99707 1265 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 TRIM6Q9C030 488 aaPredicted RBP16.75■□□□□ 0.27
SNED1-208ENST00000466618 VTA1Q9NP79 307 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 AGPAT5Q9NUQ2 364 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 HAUS2Q9NVX0 235 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.75■□□□□ 0.27
SNED1-208ENST00000466618 DOCK3Q8IZD9 2030 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 ZNF263O14978 683 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 FAM153BP0C7A2 387 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 VAV2P52735 878 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 ITGB3BPQ13352 177 aaPredicted RBP16.75■□□□□ 0.27
SNED1-208ENST00000466618 FAM153CQ494X1 144 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 CFAP58Q5T655 872 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 EEPD1Q7L9B9 569 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 FBXO16Q8IX29 292 aaPredicted RBP16.75■□□□□ 0.27
SNED1-208ENST00000466618 OSBPL9Q96SU4 736 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 ABHD16BQ9H3Z7 469 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 AGO4Q9HCK5 861 aaKnown RBP16.75■□□□□ 0.27
SNED1-208ENST00000466618 FAM153AQ9UHL3 310 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
SNED1-208ENST00000466618 E7EVH7 732 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 OR52Z1P0C646 297 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 PRPHP41219 470 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 CALCRLQ16602 461 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 TSR1Q2NL82 804 aaKnown RBP16.74■□□□□ 0.27
SNED1-208ENST00000466618 ARL6IP4Q66PJ3 421 aaKnown RBP16.74■□□□□ 0.27
SNED1-208ENST00000466618 NFRKBQ6P4R8 1299 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 CCDC121Q6ZUS5 278 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 CCDC50Q8IVM0 306 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 CCDC170Q8IYT3 715 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 PXYLP1Q8TE99 480 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 ATP6V1G3Q96LB4 118 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 FAM20AQ96MK3 541 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 GOLGA6L7A0A1B0GV03 622 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 FRMD3A2A2Y4 597 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 ATP9AO75110 1047 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 SSBP05455 408 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNED1-208ENST00000466618 TGFB3P10600 412 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 CTCFP49711 727 aaPredicted RBP16.74■□□□□ 0.27
SNED1-208ENST00000466618 ACVR2BQ13705 512 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 IL17AQ16552 155 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 ANKRD20A8PQ5CZ79 823 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 CCDC62Q6P9F0 684 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 SEPT14Q6ZU15 432 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 KIRREL3Q8IZU9 778 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 C1orf131Q8NDD1 294 aaKnown RBP16.74■□□□□ 0.27
SNED1-208ENST00000466618 TRIM58Q8NG06 486 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 SLC5A5Q92911 643 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 CDHR1Q96JP9 859 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 GDF3Q9NR23 364 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 PDGFCQ9NRA1 345 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 LRWD1Q9UFC0 647 aa16.74■□□□□ 0.27
SNED1-208ENST00000466618 PLXNA1Q9UIW2 1896 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 TRIM49BA6NDI0 452 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 DHX15O43143 795 aaKnown RBP16.73■□□□□ 0.27
SNED1-208ENST00000466618 ZNF865P0CJ78 1059 aaPredicted RBP16.73■□□□□ 0.27
SNED1-208ENST00000466618 EZRP15311 586 aaKnown RBP16.73■□□□□ 0.27
SNED1-208ENST00000466618 KCNA2P16389 499 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 CARSP49589 748 aaKnown RBP16.73■□□□□ 0.27
SNED1-208ENST00000466618 LBX1P52954 281 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 IRX1P78414 480 aaPredicted RBP16.73■□□□□ 0.27
SNED1-208ENST00000466618 SP2Q02086 613 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 TBC1D8BQ0IIM8 1120 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 KIF5AQ12840 1032 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 E2F5Q15329 346 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 C8orf74Q6P047 294 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 MREGQ8N565 214 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 GJA10Q969M2 543 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 SCLT1Q96NL6 688 aa16.73■□□□□ 0.27
SNED1-208ENST00000466618 ZNF577Q9BSK1 485 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms