RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 DNAJC8O75937 253 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 UFL1O94874 794 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 FBXO21O94952 628 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 GYG1P46976 350 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 TRAPPC10P48553 1259 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 CLCN7P51798 805 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 ZNF143P52747 638 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 TGFB2P61812 414 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 CCDC158Q5M9N0 1113 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 TTC39AQ5SRH9 613 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 NBPF12Q5TAG4 269 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 KIAA1211LQ6NV74 962 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 PKN3Q6P5Z2 889 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 C15orf52Q6ZUT6 534 aaKnown RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 TP53INP2Q8IXH6 220 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 CNTD1Q8N815 330 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 ENAHQ8N8S7 591 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 TEX19Q8NA77 164 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 TBC1D16Q8TBP0 767 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 KLHL6Q8WZ60 621 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 UBE2FQ969M7 185 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 RILPL2Q969X0 211 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 MISP3Q96FF7 219 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 COX4I2Q96KJ9 171 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 FAM84BQ96KN1 310 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 FBXL18Q96ME1 805 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 SLC6A18Q96N87 628 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 STRBPQ96SI9 672 aaKnown RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 HAUS7Q99871 368 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 DUSP15Q9H1R2 295 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 TCF7L1Q9HCS4 588 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 ZSWIM5Q9P217 1185 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 POLLQ9UGP5 575 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 TNKSO95271 1327 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 A0A1W2PQU0 124 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 SHISA3A0PJX4 238 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 CLEC3AO75596 197 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 CHGBP05060 677 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 MYL3P08590 195 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 KCNJ4P48050 445 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 NEK3P51956 506 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 SUMO1P63165 101 aaKnown RBP5.46□□□□□ -1.54
CSMD3-205ENST00000462254 HSP90AA2PQ14568 343 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-205ENST00000462254 IL31Q6EBC2 164 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 SMAP1Q8IYB5 467 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-205ENST00000462254 ABI1Q8IZP0 508 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 CNTROBQ8N137 903 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 STK11IPQ8N1F8 1099 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 TTLL6Q8N841 843 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 PIWIL2Q8TC59 973 aaKnown RBP5.46□□□□□ -1.54
CSMD3-205ENST00000462254 TTC1Q99614 292 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 AARSD1Q9BTE6 412 aaKnown RBP5.46□□□□□ -1.54
CSMD3-205ENST00000462254 PAGR1Q9BTK6 254 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 ASPNQ9BXN1 380 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 INO80BQ9C086 356 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-205ENST00000462254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.46□□□□□ -1.54
CSMD3-205ENST00000462254 IL25Q9H293 177 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 ZHX3Q9H4I2 956 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 TRIM39Q9HCM9 518 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 PRDM7Q9NQW5 492 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 PAG1Q9NWQ8 432 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 HMG20BQ9P0W2 317 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 DAAM1Q9Y4D1 1078 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 PPP2R3BQ9Y5P8 575 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 SIPA1L1O43166 1804 aa5.46□□□□□ -1.54
CSMD3-205ENST00000462254 RFX7Q2KHR2 1363 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 GOLGB1Q14789 3259 aaKnown RBP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 C9IYK1 514 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 GOLIM4O00461 696 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 ZEB2O60315 1214 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 UQCRFS1P1P0C7P4 283 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 NAT2P11245 290 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 SRFP11831 508 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 CHMLP26374 656 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 SLC7A5Q01650 507 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 SNW1Q13573 536 aaKnown RBP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 GBX1Q14549 363 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 PCBP1Q15365 356 aaKnown RBP eCLIP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 MINDY4Q4G0A6 757 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 ALFQ53S48 1182 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 CCDC93Q567U6 631 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 CAVIN4Q5BKX8 364 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 ZNF280DQ6N043 979 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 CCDC70Q6NSX1 233 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 DPP8Q6V1X1 898 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 KBTBD3Q8NAB2 608 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 TDRD7Q8NHU6 1098 aaKnown RBP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 USP33Q8TEY7 942 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 ASB11Q8WXH4 323 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 TIFAQ96CG3 184 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 ELAC2Q9BQ52 826 aaKnown RBP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 MENTQ9BUN1 341 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 IFT22Q9H7X7 185 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 PUF60Q9UHX1 559 aaKnown RBP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 NRBP1Q9UHY1 535 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 ADAMTS6Q9UKP5 1117 aa5.45□□□□□ -1.54
CSMD3-205ENST00000462254 PNMA8BQ9ULN7 279 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 APOBEC2Q9Y235 224 aaKnown RBP5.45□□□□□ -1.54
CSMD3-205ENST00000462254 ATAD5Q96QE3 1844 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms