RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 RGPD4Q7Z3J3 1758 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 PRPF40AO75400 957 aaKnown RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 MOCS3O95396 460 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 ODC1P11926 461 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 LONP1P36776 959 aaKnown RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 RPL10AP62906 217 aaKnown RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 FAM171A1Q5VUB5 890 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 C4orf50Q6ZRC1 276 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 PPP1R9BQ96SB3 815 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 CYP26B1Q9NR63 512 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 PANK4Q9NVE7 773 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 POMCP01189 267 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 RALAP11233 206 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 XRCC6P12956 609 aaKnown RBP eCLIP10.78□□□□□ -0.68
EPB41-208ENST00000460378 EIF4BP23588 611 aaKnown RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 GPC3P51654 580 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 PCBP1Q15365 356 aaKnown RBP eCLIP10.78□□□□□ -0.68
EPB41-208ENST00000460378 CCDC127Q96BQ5 260 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 SPAG5Q96R06 1193 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 AGO4Q9HCK5 861 aaKnown RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 CD207Q9UJ71 328 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 A0A087WZ62 844 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 NFKBIAP25963 317 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 PCSK1P29120 753 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 ATF7IP2Q5U623 682 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 ADAT2Q7Z6V5 191 aaKnown RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 PALB2Q86YC2 1186 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 ATOH1Q92858 354 aaPredicted RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 FAM122AQ96E09 287 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 DDX50Q9BQ39 737 aaKnown RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 FDXACB1Q9BRP7 624 aaPredicted RBP10.78□□□□□ -0.68
EPB41-208ENST00000460378 TNMDQ9H2S6 317 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 ESYT2A0FGR8 921 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 TRAK2O60296 914 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 ZNF18P17022 549 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 SCP2P22307 547 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 CCDC15Q0P6D6 951 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 PTGDRQ13258 359 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 TMEM192Q8IY95 271 aa10.78□□□□□ -0.68
EPB41-208ENST00000460378 SF3B1O75533 1304 aaKnown RBP eCLIP10.78□□□□□ -0.684e-7■■■■□ 19.9
EPB41-208ENST00000460378 PI4K2BG5E9Z4 385 aa10.77□□□□□ -0.68
EPB41-208ENST00000460378 NOLC1Q14978 699 aaKnown RBP eCLIP10.77□□□□□ -0.682e-10■■■□□ 18.2
EPB41-208ENST00000460378 HELQQ8TDG4 1101 aa10.77□□□□□ -0.68
EPB41-208ENST00000460378 TMX3Q96JJ7 454 aa10.77□□□□□ -0.68
EPB41-208ENST00000460378 KRT10P13645 584 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 PURAQ00577 322 aaKnown RBP10.77□□□□□ -0.69
EPB41-208ENST00000460378 CCDC157Q569K6 752 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 TJAP1Q5JTD0 557 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 FMNL3Q8IVF7 1028 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 C12orf50Q8NA57 414 aaPredicted RBP10.77□□□□□ -0.69
EPB41-208ENST00000460378 RIOX1Q9H6W3 641 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 COL1A2P08123 1366 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 PIK3CAP42336 1068 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 NRIP1P48552 1158 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 GLUD2P49448 558 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 ZNF618Q5T7W0 954 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 ZSWIM6Q9HCJ5 1215 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 USP25Q9UHP3 1055 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 DSEQ9UL01 958 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 RREB1Q92766 1687 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 UBXN2BQ14CS0 331 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 ATL3Q6DD88 541 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 NELFCDQ8IXH7 590 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 SIX6OS1Q8N1H7 587 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 ST7Q9NRC1 585 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 EVA1BQ9NVM1 165 aa10.77□□□□□ -0.69
EPB41-208ENST00000460378 NXF1Q9UBU9 619 aaKnown RBP10.77□□□□□ -0.69
EPB41-208ENST00000460378 UBQLN1Q9UMX0 589 aaKnown RBP10.77□□□□□ -0.69
EPB41-208ENST00000460378 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.76□□□□□ -0.69
EPB41-208ENST00000460378 SPATA31C2B4DYI2 1134 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 SREBF1P36956 1147 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 GRIK1P39086 918 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 NASPP49321 788 aaPredicted RBP10.76□□□□□ -0.69
EPB41-208ENST00000460378 SV2CQ496J9 727 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 MTHFD1LQ6UB35 978 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 SLITRK1Q96PX8 696 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.76□□□□□ -0.69
EPB41-208ENST00000460378 PADI3Q9ULW8 664 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 PCDHB9Q9Y5E1 797 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 DAPK3O43293 454 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 MAPRE1Q15691 268 aaKnown RBP10.76□□□□□ -0.69
EPB41-208ENST00000460378 TMEM31Q5JXX7 168 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 MAMDC4Q6UXC1 1216 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 VPS52Q8N1B4 723 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 PDLIM7Q9NR12 457 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 CNTNAP2Q9UHC6 1331 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 TREHO43280 583 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 ALDH1A2O94788 518 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 SERPINC1P01008 464 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 IQCF3P0C7M6 154 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 POLR2BP30876 1174 aaKnown RBP10.76□□□□□ -0.69
EPB41-208ENST00000460378 PFKPQ01813 784 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 LARP4BQ92615 738 aaKnown RBP10.76□□□□□ -0.69
EPB41-208ENST00000460378 CCDC97Q96F63 343 aaPredicted RBP10.76□□□□□ -0.69
EPB41-208ENST00000460378 TLR9Q9NR96 1032 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 KLK14Q9P0G3 267 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 ZMYND10O75800 440 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 PLA2G4BP0C869 781 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms