RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 CASD1Q96PB1 797 aa17.65■□□□□ 0.42
TRAPPC12-209ENST00000441099 PLIN2Q99541 437 aa17.65■□□□□ 0.42
TRAPPC12-209ENST00000441099 RUSC1Q9BVN2 902 aa17.65■□□□□ 0.42
TRAPPC12-209ENST00000441099 TMEM117Q9H0C3 514 aa17.65■□□□□ 0.42
TRAPPC12-209ENST00000441099 RWDD3Q9Y3V2 267 aa17.65■□□□□ 0.42
TRAPPC12-209ENST00000441099 SRPRBQ9Y5M8 271 aaKnown RBP17.65■□□□□ 0.42
TRAPPC12-209ENST00000441099 MYH9P35579 1960 aaKnown RBP17.65■□□□□ 0.42
TRAPPC12-209ENST00000441099 PTPRSQ13332 1948 aa17.64■□□□□ 0.42
TRAPPC12-209ENST00000441099 MICAL3Q7RTP6 2002 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 LRRIQ4A6NIV6 560 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 HOXA2O43364 376 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 ZNF623O75123 536 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 RB1P06400 928 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 ZSCAN22P10073 491 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 AXLP30530 894 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 CTNNB1P35222 781 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 UBA7P41226 1012 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 NAMPTP43490 491 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 NASPP49321 788 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 PKP1Q13835 747 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 SLC39A14Q15043 492 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 CLLU1OSQ5K130 101 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 FOXD4L5Q5VV16 416 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 SYT2Q8N9I0 419 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 RNF169Q8NCN4 708 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 FOXD4L4Q8WXT5 416 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 KIFAP3Q92845 792 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 CSRNP2Q9H175 543 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 FAM105AQ9NUU6 356 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 LMCD1Q9NZU5 365 aa17.64■□□□□ 0.41
TRAPPC12-209ENST00000441099 GTPBP6O43824 516 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 ERLIN2O94905 339 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 PLA2G4BP0C869 781 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 SKIP12755 728 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 RAB27AP51159 221 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 SLC12A3P55017 1021 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 MAPK7Q13164 816 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 GPM6BQ13491 265 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 LRRC55Q6ZSA7 311 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 USP49Q70CQ1 688 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 MRPL10Q7Z7H8 261 aaKnown RBP17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 CDK5RAP3Q96JB5 506 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 CLIC6Q96NY7 704 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 PLVAPQ9BX97 442 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 CCSER1Q9C0I3 900 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 FZD8Q9H461 694 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 TYW1Q9NV66 732 aaKnown RBP17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 PCDHB2Q9Y5E7 798 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 EYSQ5T1H1 3165 aa17.63■□□□□ 0.41
TRAPPC12-209ENST00000441099 MEIS3P2A8K0S8 358 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 B4GALT5O43286 388 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 HIP1RO75146 1068 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 F13A1P00488 732 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 ARF4P18085 180 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 GUCY2CP25092 1073 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 KARSQ15046 597 aaKnown RBP17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 CCDC85BQ15834 202 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 FAM187BQ17R55 369 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 SPECC1Q5M775 1068 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 NOTUMQ6P988 496 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 LINC00301Q8NCQ3 95 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 LPPQ93052 612 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 CCDC51Q96ER9 411 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 CALML4Q96GE6 196 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 CPB2Q96IY4 423 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 IFT74Q96LB3 600 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 CCDC113Q9H0I3 377 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 C2orf40Q9H1Z8 148 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 CWH43Q9H720 699 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 BLOC1S4Q9NUP1 217 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 TFIP11Q9UBB9 837 aaKnown RBP17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 HCSTQ9UBK5 93 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 TTC3P53804 2025 aa17.62■□□□□ 0.41
TRAPPC12-209ENST00000441099 SSBP05455 408 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 PLCG1P19174 1290 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 NCBP1Q09161 790 aaKnown RBP17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 PPP2R5AQ15172 486 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 LONRF3Q496Y0 759 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 ARSHQ5FYA8 562 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 ZBTB8OSQ8IWT0 167 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 MICALL1Q8N3F8 863 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 SMG8Q8ND04 991 aaKnown RBP17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 DEPTORQ8TB45 409 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 HELQQ8TDG4 1101 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 P2RX5Q93086 422 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 ZNF396Q96N95 335 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 C11orf84Q9BUA3 381 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 KIFC3Q9BVG8 833 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 TIPINQ9BVW5 301 aa17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 EIF2AQ9BY44 585 aaKnown RBP17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 PRMT7Q9NVM4 692 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC12-209ENST00000441099 SPTBN5Q9NRC6 3674 aaKnown RBP17.6■□□□□ 0.41
TRAPPC12-209ENST00000441099 TRANK1O15050 2925 aa17.6■□□□□ 0.41
TRAPPC12-209ENST00000441099 A0A1B0GUA9 196 aa17.6■□□□□ 0.41
TRAPPC12-209ENST00000441099 TTLL13PA6NNM8 815 aa17.6■□□□□ 0.41
TRAPPC12-209ENST00000441099 GRM6O15303 877 aa17.6■□□□□ 0.41
TRAPPC12-209ENST00000441099 OFD1O75665 1012 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms