RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TMC5Q6UXY8 1006 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 TMEM173Q86WV6 379 aaPredicted RBP20.21■□□□□ 0.83
VCP-202ENST00000417448 ZBP1Q9H171 429 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 KCNK12Q9HB15 430 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 DLL3Q9NYJ7 618 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 NFASCO94856 1347 aa20.21■□□□□ 0.83
VCP-202ENST00000417448 MYH9P35579 1960 aaKnown RBP20.21■□□□□ 0.83
VCP-202ENST00000417448 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.2■□□□□ 0.82
VCP-202ENST00000417448 FAM86B1E9PN63 330 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 HOXA2O43364 376 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 CXCL14O95715 111 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 CCNE2O96020 404 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 VTNP04004 478 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 FAM86B2P0C5J1 330 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 XBP1P17861 261 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 MCM2P49736 904 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 INF2Q27J81 1249 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 FAM184AQ8NB25 1140 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 DAGLBQ8NCG7 672 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 TBCKQ8TEA7 893 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 SLC22A17Q8WUG5 538 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 CRYGNQ8WXF5 182 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 RIN2Q8WYP3 895 aaPredicted RBP20.2■□□□□ 0.82
VCP-202ENST00000417448 SEMA4AQ9H3S1 761 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 FBXL21Q9UKT6 434 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 COL1A2P08123 1366 aa20.2■□□□□ 0.82
VCP-202ENST00000417448 WDR81Q562E7 1941 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 KRBA1A5PL33 1030 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 HBP1O60381 514 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 C22orf31O95567 290 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 SLC26A2P50443 739 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 ECHDC2Q86YB7 292 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 CCDC60Q8IWA6 550 aaPredicted RBP20.19■□□□□ 0.82
VCP-202ENST00000417448 ABI1Q8IZP0 508 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 VPS52Q8N1B4 723 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 SDF4Q9BRK5 362 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 CACNA1IQ9P0X4 2223 aa20.19■□□□□ 0.82
VCP-202ENST00000417448 CFAP47Q6ZTR5 3102 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 ATP4AP20648 1035 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 GJB2P29033 226 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 KRT2P35908 639 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 BCAR1P56945 870 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 TRIM29Q14134 588 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 CEP55Q53EZ4 464 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 ABHD15Q6UXT9 468 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 PIK3AP1Q6ZUJ8 805 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 GPR149Q86SP6 731 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 PLA2G4DQ86XP0 818 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 DCLK2Q8N568 766 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 RNF169Q8NCN4 708 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 HELQQ8TDG4 1101 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 GJA10Q969M2 543 aa20.18■□□□□ 0.82
VCP-202ENST00000417448 AGO4Q9HCK5 861 aaKnown RBP20.18■□□□□ 0.82
VCP-202ENST00000417448 MAP1BP46821 2468 aaKnown RBP20.18■□□□□ 0.82
VCP-202ENST00000417448 DOCK8Q8NF50 2099 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 MEIS1O00470 390 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 TDP2O95551 362 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 CYP3A4P08684 503 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 HMGN5P82970 282 aaKnown RBP20.17■□□□□ 0.82
VCP-202ENST00000417448 NONOQ15233 471 aaKnown RBP eCLIP20.17■□□□□ 0.82
VCP-202ENST00000417448 PRR16Q569H4 304 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 GALNT17Q6IS24 598 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 CCDC149Q6ZUS6 474 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 OTOP3Q7RTS5 596 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 DIS3L2Q8IYB7 885 aaKnown RBP20.17■□□□□ 0.82
VCP-202ENST00000417448 ACSF2Q96CM8 615 aaPredicted RBP20.17■□□□□ 0.82
VCP-202ENST00000417448 IRAK3Q9Y616 596 aa20.17■□□□□ 0.82
VCP-202ENST00000417448 IGLV3-22A0A075B6J6 115 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 CCDC194A0A1B0GVG4 234 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 DDX39AO00148 427 aaKnown RBP20.16■□□□□ 0.82
VCP-202ENST00000417448 BACH1O14867 736 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 N4BP1O75113 896 aaKnown RBP20.16■□□□□ 0.82
VCP-202ENST00000417448 CFHP08603 1231 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 ZNF484Q5JVG2 852 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 KRT25Q7Z3Z0 450 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 ZNF598Q86UK7 904 aaKnown RBP20.16■□□□□ 0.82
VCP-202ENST00000417448 CABP7Q86V35 215 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 BCL7CQ8WUZ0 217 aaPredicted RBP20.16■□□□□ 0.82
VCP-202ENST00000417448 TNFRSF25Q93038 417 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 TMEM169Q96HH4 297 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 HINFPQ9BQA5 517 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 SMC3Q9UQE7 1217 aa20.16■□□□□ 0.82
VCP-202ENST00000417448 WNT7AO00755 349 aa20.15■□□□□ 0.82
VCP-202ENST00000417448 CTSAP10619 480 aa20.15■□□□□ 0.82
VCP-202ENST00000417448 TEX2Q8IWB9 1127 aa20.15■□□□□ 0.82
VCP-202ENST00000417448 METTL13Q8N6R0 699 aa20.15■□□□□ 0.82
VCP-202ENST00000417448 RSAD2Q8WXG1 361 aa20.15■□□□□ 0.82
VCP-202ENST00000417448 VN1R3Q9BXE9 311 aa20.15■□□□□ 0.82
VCP-202ENST00000417448 SFXN1Q9H9B4 322 aa20.15■□□□□ 0.82
VCP-202ENST00000417448 CHD8Q9HCK8 2581 aa20.14■□□□□ 0.82
VCP-202ENST00000417448 ATP2B1P20020 1258 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 ALDH7A1P49419 539 aaKnown RBP20.14■□□□□ 0.81
VCP-202ENST00000417448 CLCN3P51790 818 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 NLRP11P59045 1033 aaKnown RBP20.14■□□□□ 0.81
VCP-202ENST00000417448 CUL4AQ13619 759 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 LETM2Q2VYF4 491 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 FAM160B1Q5W0V3 765 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 PDXDC2PQ6P474 469 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms