RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	TRS85	P46944	698 aa		5.47	□□□□□ -1.53
TFB4	YPR056W	VEL1	P53058	206 aa		5.47	□□□□□ -1.53
TFB4	YPR056W	NMA2	P53204	395 aa		5.47	□□□□□ -1.53
TFB4	YPR056W	YPL080C	Q02826	108 aa		5.47	□□□□□ -1.53
TFB4	YPR056W	YDR387C	Q04162	555 aa		5.47	□□□□□ -1.53
TFB4	YPR056W	YLL056C	Q12177	298 aa		5.47	□□□□□ -1.53
TFB4	YPR056W	NOT5	Q12514	560 aa	Predicted RBP	5.47	□□□□□ -1.53
TFB4	YPR056W	SET6	Q12529	373 aa		5.47	□□□□□ -1.53
TFB4	YPR056W	MES1	P00958	751 aa	Known RBP	5.46	□□□□□ -1.54
TFB4	YPR056W	NAM2	P11325	894 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	MBR1	P23493	339 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	ACB1	P31787	87 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	APE2	P32454	952 aa	Known RBP	5.46	□□□□□ -1.54
TFB4	YPR056W	VAM7	P32912	316 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	PRX1	P34227	261 aa	Known RBP	5.46	□□□□□ -1.54
TFB4	YPR056W	YAL037W	P39728	267 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	SNX4	P47057	423 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	YJR141W	P47172	347 aa	Predicted RBP	5.46	□□□□□ -1.54
TFB4	YPR056W	LYS20	P48570	428 aa	Known RBP	5.46	□□□□□ -1.54
TFB4	YPR056W	YTP1	P53584	459 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	IRC4	Q03036	179 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	SNU56	Q03782	492 aa	Known RBP	5.46	□□□□□ -1.54
TFB4	YPR056W	ASR1	Q06834	288 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	ALE1	Q08548	619 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	ATG34	Q12292	412 aa		5.46	□□□□□ -1.54
TFB4	YPR056W	ILV1	P00927	576 aa	Known RBP	5.45	□□□□□ -1.54
TFB4	YPR056W	DSF1	P0CX08	502 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	YNR073C	P0CX09	502 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	CBS2	P14905	389 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	ARF2	P19146	181 aa	Known RBP	5.45	□□□□□ -1.54
TFB4	YPR056W	DRE2	P36152	348 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	DER1	P38307	211 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	NPT1	P39683	429 aa	Known RBP	5.45	□□□□□ -1.54
TFB4	YPR056W	PMT6	P42934	759 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	PRM10	P42946	383 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	SFH5	P47008	294 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	TAD2	P47058	250 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	YJR056C	P47115	236 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	ADO1	P47143	340 aa	Known RBP	5.45	□□□□□ -1.54
TFB4	YPR056W	YJR154W	P47181	346 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	TOS2	P50078	622 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	PYK2	P52489	506 aa	Known RBP	5.45	□□□□□ -1.54
TFB4	YPR056W	SBH2	P52871	88 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	NBP1	P52919	319 aa	Predicted RBP	5.45	□□□□□ -1.54
TFB4	YPR056W	YLR460C	P54007	376 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	SLD5	Q03406	294 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	HER2	Q03557	464 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	RSA1	Q08932	381 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	POM33	Q12164	279 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	JLP1	Q12358	412 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	YOR338W	Q99326	363 aa		5.45	□□□□□ -1.54
TFB4	YPR056W	TPK3	P05986	398 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	MRP2	P10663	115 aa	Predicted RBP	5.44	□□□□□ -1.54
TFB4	YPR056W	STE4	P18851	423 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	TKL1	P23254	680 aa	Known RBP	5.44	□□□□□ -1.54
TFB4	YPR056W	TRR1	P29509	319 aa	Known RBP	5.44	□□□□□ -1.54
TFB4	YPR056W	SAC1	P32368	623 aa	Known RBP	5.44	□□□□□ -1.54
TFB4	YPR056W	MRPL6	P32904	214 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	MCH2	P36032	473 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	RIB5	P38145	238 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	YAP3	P38749	330 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	BMT5	P40493	336 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	JHD2	P47156	728 aa	Predicted RBP	5.44	□□□□□ -1.54
TFB4	YPR056W	ASN1	P49089	572 aa	Known RBP	5.44	□□□□□ -1.54
TFB4	YPR056W	MGA1	P53050	456 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	YGL235W	P53071	178 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	BUD32	P53323	261 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	YPR003C	P53394	754 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	DIG1	Q03063	452 aa	Known RBP	5.44	□□□□□ -1.54
TFB4	YPR056W	MSS11	Q03825	758 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	SEC13	Q04491	297 aa	Known RBP	5.44	□□□□□ -1.54
TFB4	YPR056W	TMS1	Q12116	473 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	YPL150W	Q12152	901 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	ICT1	Q12385	394 aa		5.44	□□□□□ -1.54
TFB4	YPR056W	ASP3-2	P0CX77	362 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	ASP3-3	P0CX78	362 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	ASP3-4	P0CX79	362 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	ASP3-1	P0CZ17	362 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	VPH2	P32341	215 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	ATO2	P32907	282 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	CSE1	P33307	960 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	YKL097C	P34245	136 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	ECM8	P38246	354 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	RCK2	P38623	610 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	ARP1	P38696	384 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	RPL10	P41805	221 aa	Known RBP	5.43	□□□□□ -1.54
TFB4	YPR056W	CIN2	P46670	268 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	TIS11	P47977	285 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	CPD1	P53314	239 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	SMM1	P53720	384 aa	Known RBP	5.43	□□□□□ -1.54
TFB4	YPR056W	GPI15	P53961	229 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	YDR248C	Q03786	193 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	VBA1	Q04301	562 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	DXO1	Q06349	442 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	YPL199C	Q08954	240 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	YOR114W	Q12219	294 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	EMP46	Q12396	444 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	SWI1	P09547	1314 aa		5.43	□□□□□ -1.54
TFB4	YPR056W	RPL28	P02406	149 aa	Known RBP	5.42	□□□□□ -1.54
TFB4	YPR056W	HEM2	P05373	342 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms