RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C LYS21Q12122 440 aaKnown RBP8.95□□□□□ -0.98
SSN3YPL042C ATG31Q12421 196 aa8.95□□□□□ -0.98
SSN3YPL042C AGC1Q12482 902 aa8.95□□□□□ -0.98
SSN3YPL042C SNF8Q12483 233 aa8.95□□□□□ -0.98
SSN3YPL042C PNO1Q99216 274 aaKnown RBP8.95□□□□□ -0.98
SSN3YPL042C MEK1P24719 497 aaPredicted RBP8.94□□□□□ -0.98
SSN3YPL042C PPA2P28239 310 aa8.94□□□□□ -0.98
SSN3YPL042C RML2P32611 393 aa8.94□□□□□ -0.98
SSN3YPL042C YCR087C-AP37263 153 aa8.94□□□□□ -0.98
SSN3YPL042C YPT35P38815 214 aaKnown RBP8.94□□□□□ -0.98
SSN3YPL042C AYR1P40471 297 aa8.94□□□□□ -0.98
SSN3YPL042C DBP6P53734 629 aaKnown RBP8.94□□□□□ -0.98
SSN3YPL042C IDP3P53982 420 aaKnown RBP8.94□□□□□ -0.98
SSN3YPL042C DCI1Q08558 271 aa8.94□□□□□ -0.98
SSN3YPL042C YPL066WQ12194 479 aa8.94□□□□□ -0.98
SSN3YPL042C RGT2Q12300 763 aa8.94□□□□□ -0.98
SSN3YPL042C WIP1Q2V2P8 89 aa8.94□□□□□ -0.98
SSN3YPL042C YKL018C-AQ3E7A7 99 aa8.94□□□□□ -0.98
SSN3YPL042C AI1P03875 834 aa8.94□□□□□ -0.98
SSN3YPL042C TYR1P20049 452 aa8.94□□□□□ -0.98
SSN3YPL042C SGV1P23293 657 aaKnown RBP8.94□□□□□ -0.98
SSN3YPL042C PET18P25362 215 aa8.94□□□□□ -0.98
SSN3YPL042C GBP2P25555 427 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
SSN3YPL042C LAC1P28496 418 aa8.94□□□□□ -0.98
SSN3YPL042C MCH2P36032 473 aa8.94□□□□□ -0.98
SSN3YPL042C DOA1P36037 715 aa8.94□□□□□ -0.98
SSN3YPL042C ROT2P38138 954 aa8.94□□□□□ -0.98
SSN3YPL042C MET28P40573 187 aa8.94□□□□□ -0.98
SSN3YPL042C PSA1P41940 361 aaKnown RBP8.94□□□□□ -0.98
SSN3YPL042C COS6P53344 381 aa8.94□□□□□ -0.98
SSN3YPL042C TMA20P89886 181 aaPredicted RBP8.94□□□□□ -0.98
SSN3YPL042C GIP3Q03016 1276 aa8.94□□□□□ -0.98
SSN3YPL042C YDR061WQ12298 539 aa8.94□□□□□ -0.98
SSN3YPL042C RPS4AP0CX35 261 aaKnown RBP8.93□□□□□ -0.98
SSN3YPL042C RPS4BP0CX36 261 aaKnown RBP8.93□□□□□ -0.98
SSN3YPL042C MRP13P12686 339 aa8.93□□□□□ -0.98
SSN3YPL042C CWP1P28319 239 aa8.93□□□□□ -0.98
SSN3YPL042C EMC3P36039 253 aa8.93□□□□□ -0.98
SSN3YPL042C BEM2P39960 2167 aaKnown RBP8.93□□□□□ -0.98
SSN3YPL042C YEL020CP39994 560 aa8.93□□□□□ -0.98
SSN3YPL042C COS12P53053 380 aa8.93□□□□□ -0.98
SSN3YPL042C YNR014WP53719 212 aa8.93□□□□□ -0.98
SSN3YPL042C IRC15Q02733 499 aa8.93□□□□□ -0.98
SSN3YPL042C BTS1Q12051 335 aa8.93□□□□□ -0.98
SSN3YPL042C PAA1Q12447 191 aaKnown RBP8.93□□□□□ -0.98
SSN3YPL042C RPS17AP02407 136 aaKnown RBP8.92□□□□□ -0.98
SSN3YPL042C RPS17BP14127 136 aaKnown RBP8.92□□□□□ -0.98
SSN3YPL042C PET9P18239 318 aaKnown RBP8.92□□□□□ -0.98
SSN3YPL042C TUL1P36096 758 aa8.92□□□□□ -0.98
SSN3YPL042C MSS4P38994 779 aa8.92□□□□□ -0.98
SSN3YPL042C YFR020WP43600 232 aa8.92□□□□□ -0.98
SSN3YPL042C PPT1P53043 513 aa8.92□□□□□ -0.98
SSN3YPL042C RMD9P53140 646 aaKnown RBP8.92□□□□□ -0.98
SSN3YPL042C ROT1Q03691 256 aa8.92□□□□□ -0.98
SSN3YPL042C YHC1Q05900 231 aaKnown RBP8.92□□□□□ -0.98
SSN3YPL042C ATG33Q06485 197 aa8.92□□□□□ -0.98
SSN3YPL042C CRT10Q08226 957 aa8.92□□□□□ -0.98
SSN3YPL042C RCN2Q12044 265 aa8.92□□□□□ -0.98
SSN3YPL042C YLR108CQ12259 485 aa8.92□□□□□ -0.98
SSN3YPL042C RAS2P01120 322 aaKnown RBP8.91□□□□□ -0.98
SSN3YPL042C SLY41P22215 453 aa8.91□□□□□ -0.98
SSN3YPL042C CNA1P23287 553 aa8.91□□□□□ -0.98
SSN3YPL042C TCD2P36101 447 aaKnown RBP8.91□□□□□ -0.98
SSN3YPL042C RGI1P40043 161 aaPredicted RBP8.91□□□□□ -0.98
SSN3YPL042C CAK1P43568 368 aaPredicted RBP8.91□□□□□ -0.98
SSN3YPL042C AIM22P47051 409 aa8.91□□□□□ -0.98
SSN3YPL042C GET1P53192 235 aa8.91□□□□□ -0.98
SSN3YPL042C SKO1Q02100 647 aa8.91□□□□□ -0.98
SSN3YPL042C MET31Q03081 177 aa8.91□□□□□ -0.98
SSN3YPL042C RQC1Q05468 723 aaKnown RBP8.91□□□□□ -0.98
SSN3YPL042C YLR283WQ05867 314 aa8.91□□□□□ -0.98
SSN3YPL042C FMP16Q12497 93 aa8.91□□□□□ -0.98
SSN3YPL042C MET2P08465 486 aa8.91□□□□□ -0.98
SSN3YPL042C IFM1P25038 676 aa8.91□□□□□ -0.98
SSN3YPL042C CNB1P25296 175 aa8.91□□□□□ -0.98
SSN3YPL042C CHA1P25379 360 aaKnown RBP8.91□□□□□ -0.98
SSN3YPL042C PDX3P38075 228 aaKnown RBP8.91□□□□□ -0.98
SSN3YPL042C BAT1P38891 393 aaKnown RBP8.91□□□□□ -0.98
SSN3YPL042C BDH1P39714 382 aa8.91□□□□□ -0.98
SSN3YPL042C FMP33P46998 180 aa8.91□□□□□ -0.98
SSN3YPL042C YNL140CP53910 189 aa8.91□□□□□ -0.98
SSN3YPL042C YNL033WP53964 284 aa8.91□□□□□ -0.98
SSN3YPL042C YNL019CP53975 284 aa8.91□□□□□ -0.98
SSN3YPL042C NOG1Q02892 647 aaKnown RBP8.91□□□□□ -0.98
SSN3YPL042C RIM13Q03792 727 aa8.91□□□□□ -0.98
SSN3YPL042C YLR036CQ07986 203 aa8.91□□□□□ -0.98
SSN3YPL042C RUP1Q12242 671 aa8.91□□□□□ -0.98
SSN3YPL042C THP2O13539 261 aaKnown RBP8.9□□□□□ -0.98
SSN3YPL042C RPP1AP05318 106 aaPredicted RBP8.9□□□□□ -0.98
SSN3YPL042C RHO1P06780 209 aaKnown RBP8.9□□□□□ -0.98
SSN3YPL042C YGL041W-AP0C5N3 154 aa8.9□□□□□ -0.98
SSN3YPL042C SCL1P21243 252 aaKnown RBP8.9□□□□□ -0.98
SSN3YPL042C VPS21P36017 210 aaKnown RBP8.9□□□□□ -0.98
SSN3YPL042C YBR139WP38109 508 aa8.9□□□□□ -0.98
SSN3YPL042C IMD2P38697 523 aaKnown RBP8.9□□□□□ -0.98
SSN3YPL042C GGC1P38988 300 aa8.9□□□□□ -0.98
SSN3YPL042C SLZ1P40167 298 aa8.9□□□□□ -0.98
SSN3YPL042C GID8P40208 455 aa8.9□□□□□ -0.98
SSN3YPL042C IRC5P43610 853 aa8.9□□□□□ -0.98
SSN3YPL042C LSM8P47093 109 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 107 ms