RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C RAS2P01120 322 aaKnown RBP5.28□□□□□ -1.56
CLP1YOR250C GCN4P03069 281 aa5.28□□□□□ -1.56
CLP1YOR250C PEX34P25584 144 aa5.28□□□□□ -1.56
CLP1YOR250C YIH1P25637 258 aa5.28□□□□□ -1.56
CLP1YOR250C YCR099CP25657 155 aa5.28□□□□□ -1.56
CLP1YOR250C ATP11P32453 318 aa5.28□□□□□ -1.56
CLP1YOR250C SRP102P36057 244 aaPredicted RBP5.28□□□□□ -1.56
CLP1YOR250C AIM29P36154 155 aa5.28□□□□□ -1.56
CLP1YOR250C MRPL3P36516 390 aa5.28□□□□□ -1.56
CLP1YOR250C RCK1P38622 512 aa5.28□□□□□ -1.56
CLP1YOR250C RRP4P38792 359 aaKnown RBP5.28□□□□□ -1.56
CLP1YOR250C MNL1P38888 796 aa5.28□□□□□ -1.56
CLP1YOR250C BUR6P40096 142 aa5.28□□□□□ -1.56
CLP1YOR250C ALG8P40351 577 aa5.28□□□□□ -1.56
CLP1YOR250C YJL218WP40892 196 aaKnown RBP5.28□□□□□ -1.56
CLP1YOR250C ERG10P41338 398 aaKnown RBP5.28□□□□□ -1.56
CLP1YOR250C DLD2P46681 530 aaKnown RBP5.28□□□□□ -1.56
CLP1YOR250C UBC12P52491 188 aa5.28□□□□□ -1.56
CLP1YOR250C NBP35P52920 328 aa5.28□□□□□ -1.56
CLP1YOR250C SPC98P53540 846 aa5.28□□□□□ -1.56
CLP1YOR250C CAF40P53829 373 aa5.28□□□□□ -1.56
CLP1YOR250C EFM6P53970 246 aa5.28□□□□□ -1.56
CLP1YOR250C APM1Q00776 475 aaPredicted RBP5.28□□□□□ -1.56
CLP1YOR250C NUP116Q02630 1113 aa5.28□□□□□ -1.56
CLP1YOR250C YPL068CQ02749 293 aa5.28□□□□□ -1.56
CLP1YOR250C SCS7Q03529 384 aa5.28□□□□□ -1.56
CLP1YOR250C VHS1Q03785 461 aa5.28□□□□□ -1.56
CLP1YOR250C ARX1Q03862 593 aaKnown RBP5.28□□□□□ -1.56
CLP1YOR250C MFB1Q04922 465 aa5.28□□□□□ -1.56
CLP1YOR250C MHR1Q06630 226 aa5.28□□□□□ -1.56
CLP1YOR250C SNA4Q07549 140 aa5.28□□□□□ -1.56
CLP1YOR250C YOL107WQ12239 342 aa5.28□□□□□ -1.56
CLP1YOR250C ATP14Q12349 124 aa5.28□□□□□ -1.56
CLP1YOR250C ICT1Q12385 394 aa5.28□□□□□ -1.56
CLP1YOR250C PAA1Q12447 191 aaKnown RBP5.28□□□□□ -1.56
CLP1YOR250C SKM1Q12469 655 aa5.28□□□□□ -1.56
CLP1YOR250C SUS1Q6WNK7 96 aa5.28□□□□□ -1.56
CLP1YOR250C HRP1Q99383 534 aaKnown RBP5.28□□□□□ -1.56
CLP1YOR250C HIS1P00498 297 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C CAR2P07991 424 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C AMD1P15274 810 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C RNP1P32385 249 aa5.27□□□□□ -1.57
CLP1YOR250C HOG1P32485 435 aa5.27□□□□□ -1.57
CLP1YOR250C PET309P32522 965 aaPredicted RBP5.27□□□□□ -1.57
CLP1YOR250C HMT1P38074 348 aa5.27□□□□□ -1.57
CLP1YOR250C SHE3P38272 425 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C PRS2P38620 318 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C YHR033WP38690 423 aa5.27□□□□□ -1.57
CLP1YOR250C EFM1P38732 585 aa5.27□□□□□ -1.57
CLP1YOR250C RMD6P39975 231 aa5.27□□□□□ -1.57
CLP1YOR250C VRG4P40107 337 aa5.27□□□□□ -1.57
CLP1YOR250C SNG1P46950 547 aa5.27□□□□□ -1.57
CLP1YOR250C YAE1P47118 141 aaPredicted RBP5.27□□□□□ -1.57
CLP1YOR250C ECM27P47144 725 aa5.27□□□□□ -1.57
CLP1YOR250C ASK10P48361 1146 aa5.27□□□□□ -1.57
CLP1YOR250C PAC10P48363 199 aa5.27□□□□□ -1.57
CLP1YOR250C YGL204CP53089 101 aa5.27□□□□□ -1.57
CLP1YOR250C STR3P53101 465 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C MPC1P53157 130 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C ART5P53244 586 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C PRM1P53835 661 aa5.27□□□□□ -1.57
CLP1YOR250C ATG4P53867 494 aa5.27□□□□□ -1.57
CLP1YOR250C IGO1P53897 168 aa5.27□□□□□ -1.57
CLP1YOR250C LSM7P53905 115 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C IDP3P53982 420 aaKnown RBP5.27□□□□□ -1.57
CLP1YOR250C IRC15Q02733 499 aa5.27□□□□□ -1.57
CLP1YOR250C YMR034CQ05131 434 aaPredicted RBP5.27□□□□□ -1.57
CLP1YOR250C DCR2Q05924 578 aa5.27□□□□□ -1.57
CLP1YOR250C BOP2Q06150 570 aa5.27□□□□□ -1.57
CLP1YOR250C LDB18Q07887 179 aa5.27□□□□□ -1.57
CLP1YOR250C SYC1Q08553 188 aaPredicted RBP5.27□□□□□ -1.57
CLP1YOR250C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
CLP1YOR250C SNF8Q12483 233 aa5.27□□□□□ -1.57
CLP1YOR250C AFI1Q99222 893 aa5.27□□□□□ -1.57
CLP1YOR250C Q0142Q9ZZW4 58 aa5.27□□□□□ -1.57
CLP1YOR250C YBR085C-AO43137 85 aa5.26□□□□□ -1.57
CLP1YOR250C SPS2P08459 502 aa5.26□□□□□ -1.57
CLP1YOR250C MET2P08465 486 aa5.26□□□□□ -1.57
CLP1YOR250C RPL3P14126 387 aaKnown RBP5.26□□□□□ -1.57
CLP1YOR250C MIH1P23748 554 aa5.26□□□□□ -1.57
CLP1YOR250C CNB1P25296 175 aa5.26□□□□□ -1.57
CLP1YOR250C MF(ALPHA)2P32435 120 aa5.26□□□□□ -1.57
CLP1YOR250C NDC1P32500 655 aa5.26□□□□□ -1.57
CLP1YOR250C SUR1P33300 382 aa5.26□□□□□ -1.57
CLP1YOR250C CBT1P36038 271 aaPredicted RBP5.26□□□□□ -1.57
CLP1YOR250C YKR051WP36142 418 aa5.26□□□□□ -1.57
CLP1YOR250C MAL32P38158 584 aa5.26□□□□□ -1.57
CLP1YOR250C SSH1P38353 490 aaKnown RBP5.26□□□□□ -1.57
CLP1YOR250C YHL041WP38730 149 aa5.26□□□□□ -1.57
CLP1YOR250C NVJ1P38881 321 aa5.26□□□□□ -1.57
CLP1YOR250C HRB1P38922 454 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
CLP1YOR250C DHH1P39517 506 aaKnown RBP5.26□□□□□ -1.57
CLP1YOR250C PTI1P39927 425 aaPredicted RBP5.26□□□□□ -1.57
CLP1YOR250C GDS1P41913 522 aa5.26□□□□□ -1.57
CLP1YOR250C CAK1P43568 368 aaPredicted RBP5.26□□□□□ -1.57
CLP1YOR250C YFR018CP43599 363 aa5.26□□□□□ -1.57
CLP1YOR250C IDS2P46958 469 aa5.26□□□□□ -1.57
CLP1YOR250C PMT4P46971 762 aa5.26□□□□□ -1.57
CLP1YOR250C EAF6P47128 113 aa5.26□□□□□ -1.57
CLP1YOR250C JHD2P47156 728 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms