RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A MNL1P38888 796 aa0.44□□□□□ -2.34
YMR172C-AYMR172C-A NDE1P40215 560 aa0.44□□□□□ -2.34
YMR172C-AYMR172C-A ERB1Q04660 807 aaKnown RBP0.44□□□□□ -2.34
YMR172C-AYMR172C-A RDS3Q06835 107 aaPredicted RBP0.44□□□□□ -2.34
YMR172C-AYMR172C-A NOP6Q07623 225 aaKnown RBP0.44□□□□□ -2.34
YMR172C-AYMR172C-A YOL075CQ08234 1294 aa0.44□□□□□ -2.34
YMR172C-AYMR172C-A MHP1P43638 1398 aa0.44□□□□□ -2.34
YMR172C-AYMR172C-A YOL163WP0CF20 169 aa0.43□□□□□ -2.34
YMR172C-AYMR172C-A FUR1P18562 216 aaKnown RBP0.43□□□□□ -2.34
YMR172C-AYMR172C-A ADK2P26364 225 aa0.43□□□□□ -2.34
YMR172C-AYMR172C-A SPP381P38282 291 aaPredicted RBP0.43□□□□□ -2.34
YMR172C-AYMR172C-A LSM5P40089 93 aaKnown RBP0.43□□□□□ -2.34
YMR172C-AYMR172C-A TCB2P48231 1178 aa0.43□□□□□ -2.34
YMR172C-AYMR172C-A YGR111WP53265 400 aa0.43□□□□□ -2.34
YMR172C-AYMR172C-A SSU72P53538 206 aaPredicted RBP0.43□□□□□ -2.34
YMR172C-AYMR172C-A DCI1Q08558 271 aa0.43□□□□□ -2.34
YMR172C-AYMR172C-A YAK1P14680 807 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A DAP2P18962 818 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A SCO1P23833 295 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A RRT12P25381 491 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A EFB1P32471 206 aaKnown RBP0.42□□□□□ -2.34
YMR172C-AYMR172C-A LYS12P40495 371 aaKnown RBP0.42□□□□□ -2.34
YMR172C-AYMR172C-A ZIM17P42844 174 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A YMR166CQ03829 368 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A SUE1Q06524 206 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A VPS68Q12016 184 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A TIM22Q12328 207 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A YOR012WQ12351 137 aa0.42□□□□□ -2.34
YMR172C-AYMR172C-A VPS1P21576 704 aaKnown RBP0.41□□□□□ -2.34
YMR172C-AYMR172C-A VAM7P32912 316 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A YKL187CP34231 750 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A YHR177WP38867 453 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A EDC2P40023 145 aaPredicted RBP0.41□□□□□ -2.34
YMR172C-AYMR172C-A DSE1P40077 573 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A LCB2P40970 561 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A MEH1Q02205 184 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A NDL1Q06568 189 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A UAF30Q08747 228 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A TAF10Q12030 206 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A RRG1Q12167 365 aaPredicted RBP0.41□□□□□ -2.34
YMR172C-AYMR172C-A SCM3Q12334 223 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A TRM10Q12400 293 aa0.41□□□□□ -2.34
YMR172C-AYMR172C-A DCP1Q12517 231 aaPredicted RBP0.41□□□□□ -2.34
YMR172C-AYMR172C-A CDC42P19073 191 aa0.4□□□□□ -2.35
YMR172C-AYMR172C-A SRP72P38688 640 aaKnown RBP0.4□□□□□ -2.35
YMR172C-AYMR172C-A LSM4P40070 187 aaKnown RBP0.4□□□□□ -2.35
YMR172C-AYMR172C-A SDS23P53172 527 aa0.4□□□□□ -2.35
YMR172C-AYMR172C-A LST7P53237 242 aa0.4□□□□□ -2.35
YMR172C-AYMR172C-A IPK1Q06667 281 aa0.4□□□□□ -2.35
YMR172C-AYMR172C-A RTC5Q12108 567 aaKnown RBP0.4□□□□□ -2.35
YMR172C-AYMR172C-A ERP3Q12403 225 aa0.4□□□□□ -2.35
YMR172C-AYMR172C-A PRE7P23724 241 aaKnown RBP0.39□□□□□ -2.35
YMR172C-AYMR172C-A LTV1P34078 463 aa0.39□□□□□ -2.35
YMR172C-AYMR172C-A MPE1P35728 441 aaKnown RBP0.39□□□□□ -2.35
YMR172C-AYMR172C-A LSG1P53145 640 aaKnown RBP0.39□□□□□ -2.35
YMR172C-AYMR172C-A SRN2Q99176 213 aa0.39□□□□□ -2.35
YMR172C-AYMR172C-A CBP2P03874 630 aaPredicted RBP0.38□□□□□ -2.35
YMR172C-AYMR172C-A MDH1P17505 334 aaKnown RBP RIP-Chip data0.38□□□□□ -2.35not detected
YMR172C-AYMR172C-A EPL1P43572 832 aa0.38□□□□□ -2.35
YMR172C-AYMR172C-A MIG2P53035 382 aa0.38□□□□□ -2.35
YMR172C-AYMR172C-A ACT1P60010 375 aaKnown RBP0.38□□□□□ -2.35
YMR172C-AYMR172C-A RMT2Q03305 412 aa0.38□□□□□ -2.35
YMR172C-AYMR172C-A PRR2Q12310 699 aa0.38□□□□□ -2.35
YMR172C-AYMR172C-A ISA2Q12425 185 aa0.38□□□□□ -2.35
YMR172C-AYMR172C-A PFK27Q12471 397 aaPredicted RBP0.38□□□□□ -2.35
YMR172C-AYMR172C-A RPL26AP05743 127 aaKnown RBP0.37□□□□□ -2.35
YMR172C-AYMR172C-A MSK1P32048 576 aa0.37□□□□□ -2.35
YMR172C-AYMR172C-A KTI12P34253 313 aaKnown RBP0.37□□□□□ -2.35
YMR172C-AYMR172C-A PIR5P46999 287 aa0.37□□□□□ -2.35
YMR172C-AYMR172C-A YJL027CP47063 138 aaPredicted RBP0.37□□□□□ -2.35
YMR172C-AYMR172C-A YJR141WP47172 347 aaPredicted RBP0.37□□□□□ -2.35
YMR172C-AYMR172C-A UFD1P53044 361 aa0.37□□□□□ -2.35
YMR172C-AYMR172C-A RPL26BP53221 127 aaKnown RBP0.37□□□□□ -2.35
YMR172C-AYMR172C-A TPC1P53257 314 aa0.37□□□□□ -2.35
YMR172C-AYMR172C-A RSM27P53305 110 aa0.37□□□□□ -2.35
YMR172C-AYMR172C-A SPO77Q06134 477 aa0.37□□□□□ -2.35
YMR172C-AYMR172C-A SPH1Q06160 661 aa0.37□□□□□ -2.35
YMR172C-AYMR172C-A YDL121CQ07541 149 aa0.37□□□□□ -2.35
YMR172C-AYMR172C-A INH1P01097 85 aa0.36□□□□□ -2.35
YMR172C-AYMR172C-A DBR1P24309 405 aaKnown RBP0.36□□□□□ -2.35
YMR172C-AYMR172C-A SNL1P40548 159 aa0.36□□□□□ -2.35
YMR172C-AYMR172C-A PMT4P46971 762 aa0.36□□□□□ -2.35
YMR172C-AYMR172C-A MPS2P53159 387 aa0.36□□□□□ -2.35
YMR172C-AYMR172C-A RET3P53600 189 aa0.36□□□□□ -2.35
YMR172C-AYMR172C-A ALG9P53868 555 aaKnown RBP0.36□□□□□ -2.35
YMR172C-AYMR172C-A SMP3Q04174 516 aa0.36□□□□□ -2.35
YMR172C-AYMR172C-A DCR2Q05924 578 aa0.36□□□□□ -2.35
YMR172C-AYMR172C-A TDH1P00360 332 aaKnown RBP0.35□□□□□ -2.35
YMR172C-AYMR172C-A CDC31P06704 161 aaKnown RBP0.35□□□□□ -2.35
YMR172C-AYMR172C-A YBL028CP38202 106 aa0.35□□□□□ -2.35
YMR172C-AYMR172C-A ATG7P38862 630 aa0.35□□□□□ -2.35
YMR172C-AYMR172C-A PES4P39684 611 aa0.35□□□□□ -2.35
YMR172C-AYMR172C-A YJR146WP47174 117 aa0.35□□□□□ -2.35
YMR172C-AYMR172C-A BIO4P53630 237 aa0.35□□□□□ -2.35
YMR172C-AYMR172C-A CSM3Q04659 317 aa0.35□□□□□ -2.35
YMR172C-AYMR172C-A RPN6Q12377 434 aa0.35□□□□□ -2.35
YMR172C-AYMR172C-A HIS3P06633 220 aa0.34□□□□□ -2.36
YMR172C-AYMR172C-A PDX1P16451 410 aa0.34□□□□□ -2.36
YMR172C-AYMR172C-A ARF2P19146 181 aaKnown RBP0.34□□□□□ -2.36
YMR172C-AYMR172C-A SUR1P33300 382 aa0.34□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms