RNA–Protein interactions for RNA: YMR013C

SEC59, Transcript of Dolichol kinase, yeast

Gene SEC59, Length 1,560 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC59	YMR013C	ATP6	P00854	259 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	RPL23A	P0CX41	137 aa	Known RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	RPL23B	P0CX42	137 aa	Known RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	PRO3	P32263	286 aa	Known RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	NDT80	P38830	627 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	YAR1	P46683	200 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	PMT4	P46971	762 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	MNT4	P53745	580 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	CWC25	P53854	179 aa	Known RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	CRZ1	P53968	678 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	SRL4	Q03085	281 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	TRM82	Q03774	444 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	YMR027W	Q04371	470 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	GRS2	Q06817	618 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	ASR1	Q06834	288 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	YDL114W	Q07530	308 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	TIP41	Q12199	356 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	FRE8	Q12209	686 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	YDL199C	Q12407	687 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	REP1	P03871	373 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	HEM4	P06174	275 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	RPS14A	P06367	137 aa	Known RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	RPS18A	P0CX55	146 aa	Known RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	RPS18B	P0CX56	146 aa	Predicted RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	MSI1	P13712	422 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	HPR1	P17629	752 aa	Known RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
SEC59	YMR013C	RCK2	P38623	610 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	RPS14B	P39516	138 aa	Known RBP	3.17	□□□□□ -1.9
SEC59	YMR013C	COA1	P40452	197 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	FMC1	P40491	155 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	MST27	P53176	234 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	YMR209C	Q03648	457 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	YLR012C	Q07927	99 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	POM33	Q12164	279 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	YER078W-A	Q3E7A2	54 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	IZH4	Q99393	312 aa		3.17	□□□□□ -1.9
SEC59	YMR013C	RAD3	P06839	778 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	PRB1	P09232	635 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	RPS8A	P0CX39	200 aa	Known RBP	3.16	□□□□□ -1.9
SEC59	YMR013C	RPS8B	P0CX40	200 aa	Known RBP	3.16	□□□□□ -1.9
SEC59	YMR013C	SPS100	P13130	326 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	DOA4	P32571	926 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	SUA5	P32579	426 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	SDH3	P33421	198 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	YKT6	P36015	200 aa	Known RBP	3.16	□□□□□ -1.9
SEC59	YMR013C	TCD1	P38756	429 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	TDA11	P38854	504 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	RTR1	P40084	226 aa	Predicted RBP	3.16	□□□□□ -1.9
SEC59	YMR013C	SHQ1	P40486	507 aa	Predicted RBP	3.16	□□□□□ -1.9
SEC59	YMR013C	GCN20	P43535	752 aa	Known RBP	3.16	□□□□□ -1.9
SEC59	YMR013C	SHY1	P53266	389 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	SNX41	Q04053	625 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	YHC1	Q05900	231 aa	Known RBP	3.16	□□□□□ -1.9
SEC59	YMR013C	RIF2	Q06208	395 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	RDL2	Q08742	149 aa	Known RBP	3.16	□□□□□ -1.9
SEC59	YMR013C	PPT2	Q12036	173 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	YOR029W	Q12243	111 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	ATG31	Q12421	196 aa		3.16	□□□□□ -1.9
SEC59	YMR013C	ARG80	P07249	177 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	RPL31A	P0C2H8	113 aa	Known RBP	3.15	□□□□□ -1.91
SEC59	YMR013C	PET123	P17558	318 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	MET16	P18408	261 aa	Predicted RBP	3.15	□□□□□ -1.91
SEC59	YMR013C	RRT12	P25381	491 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	BMH2	P34730	273 aa	Known RBP	3.15	□□□□□ -1.91
SEC59	YMR013C	RPC37	P36121	282 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	BIG1	P38813	335 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	HEM14	P40012	539 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	YER085C	P40058	173 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	YPL077C	Q02831	240 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	INP2	Q03824	705 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	PBA1	Q05778	276 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	MFG1	Q07684	458 aa		3.15	□□□□□ -1.91
SEC59	YMR013C	ILV1	P00927	576 aa	Known RBP	3.14	□□□□□ -1.91
SEC59	YMR013C	VPS1	P21576	704 aa	Known RBP	3.14	□□□□□ -1.91
SEC59	YMR013C	MIR1	P23641	311 aa	Known RBP	3.14	□□□□□ -1.91
SEC59	YMR013C	YCR016W	P25617	290 aa	Known RBP	3.14	□□□□□ -1.91
SEC59	YMR013C	RPL16B	P26785	198 aa	Known RBP	3.14	□□□□□ -1.91
SEC59	YMR013C	PMT2	P31382	759 aa		3.14	□□□□□ -1.91
SEC59	YMR013C	YKL063C	P35725	167 aa		3.14	□□□□□ -1.91
SEC59	YMR013C	PTI1	P39927	425 aa	Predicted RBP	3.14	□□□□□ -1.91
SEC59	YMR013C	YIA6	P40556	373 aa		3.14	□□□□□ -1.91
SEC59	YMR013C	GDS1	P41913	522 aa		3.14	□□□□□ -1.91
SEC59	YMR013C	EGT2	P42835	1041 aa		3.14	□□□□□ -1.91
SEC59	YMR013C	SWC4	P53201	476 aa		3.14	□□□□□ -1.91
SEC59	YMR013C	SUR7	P54003	302 aa		3.14	□□□□□ -1.91
SEC59	YMR013C	ADH6	Q04894	360 aa	Known RBP	3.14	□□□□□ -1.91
SEC59	YMR013C	TAF10	Q12030	206 aa		3.14	□□□□□ -1.91
SEC59	YMR013C	UTP23	Q12339	254 aa	Known RBP	3.14	□□□□□ -1.91
SEC59	YMR013C	CHD1	P32657	1468 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	CTA1	P15202	515 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	ERD1	P16151	362 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	RPB4	P20433	221 aa	Predicted RBP	3.13	□□□□□ -1.91
SEC59	YMR013C	DAL82	P21705	255 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	CPR3	P25719	182 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	PRR1	P28708	518 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	KRE6	P32486	720 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	PDC2	P32896	925 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	CSE2	P33308	149 aa		3.13	□□□□□ -1.91
SEC59	YMR013C	YKL071W	P36086	256 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms