RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	SNU114	P36048	1008 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	RIB1	P38066	345 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	CIN4	P39110	191 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	YIA6	P40556	373 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	MNT4	P53745	580 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	BOP3	P53958	396 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	EBS1	Q03466	884 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	ENT5	Q03769	411 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	ASR1	Q06834	288 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	SYO1	Q07395	620 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	ADH2	P00331	348 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	YCL068C	P25593	260 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	LTV1	P34078	463 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	DOA1	P36037	715 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	YKR015C	P36111	568 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	SHE3	P38272	425 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	SUN4	P53616	420 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	CDC14	Q00684	551 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	CTF19	Q02732	369 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	BET5	Q03630	159 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	GSH2	Q08220	491 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	YOR032W-A	Q8TGS1	66 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	GPH1	P06738	902 aa	Known RBP	1.11	□□□□□ -2.23
CLU1	YMR012W	KSS1	P14681	368 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	ECM4	P36156	370 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	YMR144W	P40214	342 aa	Known RBP	1.11	□□□□□ -2.23
CLU1	YMR012W	CTK3	P46963	296 aa	Predicted RBP	1.11	□□□□□ -2.23
CLU1	YMR012W	KAP114	P53067	1004 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	CGR1	P53188	120 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	GND2	P53319	492 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	VTA1	Q06263	330 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	YLR036C	Q07986	203 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	YAP7	Q08182	245 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	YOL073C	Q08232	322 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	ENB1	Q08299	606 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	VIK1	Q12045	647 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	SFG1	Q12507	346 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	ADF1	Q2V2Q1	113 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	PRP18	P33411	251 aa	Predicted RBP	1.11	□□□□□ -2.23
CLU1	YMR012W	MRX3	P38172	270 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	NDT80	P38830	627 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	RCY1	P39531	840 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	MIT1	P40002	666 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	YKE4	P40544	346 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	ASN2	P49090	572 aa	Known RBP	1.11	□□□□□ -2.23
CLU1	YMR012W	ESBP6	P53918	673 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	SEG1	Q04279	960 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	LEA1	Q08963	238 aa	Predicted RBP	1.11	□□□□□ -2.23
CLU1	YMR012W	MRP2	P10663	115 aa	Predicted RBP	1.11	□□□□□ -2.23
CLU1	YMR012W	PCT1	P13259	424 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	SRP14	P38985	146 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	TIM17	P39515	158 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	YIL067C	P40514	678 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	GUF1	P46943	645 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	STE24	P47154	453 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	CPD1	P53314	239 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	CWC21	Q03375	135 aa	Known RBP	1.11	□□□□□ -2.23
CLU1	YMR012W	BNA7	Q04066	261 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	DCR2	Q05924	578 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	GRX8	Q05926	109 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	YPL150W	Q12152	901 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	YOR342C	Q12182	319 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	ICT1	Q12385	394 aa		1.11	□□□□□ -2.23
CLU1	YMR012W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	1.1	□□□□□ -2.23	not detected
CLU1	YMR012W	YHL044W	P38727	235 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	MLH1	P38920	769 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	VHS2	P40463	436 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	PHO86	P46956	311 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	IKS1	P47042	667 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	AVT4	P50944	713 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	ARP5	P53946	755 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	MRS2	Q01926	470 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	VHS1	Q03785	461 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	CAC2	Q04199	468 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	SSC1	P0CS90	654 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	SPO12	P17123	173 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	YJU2	P28320	278 aa	Predicted RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	PUP2	P32379	260 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	PTR2	P32901	601 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	SFC1	P33303	322 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	SGE1	P33335	543 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	ECM15	P35195	104 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	YKL023W	P36103	277 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	YER188W	P40103	239 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	YMR147W	P40218	223 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	ADO1	P47143	340 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	COS5	P47187	383 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	SNO2	P53823	222 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	ARC18	Q05933	178 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	YPR147C	Q06522	304 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	COS7	Q07788	383 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	YOL160W	Q08321	113 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	NCA2	Q12374	616 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	THP2	O13539	261 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	PGK1	P00560	416 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	SUC2	P00724	532 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	SPS4	P09937	338 aa		1.1	□□□□□ -2.23
CLU1	YMR012W	ZWF1	P11412	505 aa	Known RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	GCD2	P12754	651 aa	Predicted RBP	1.1	□□□□□ -2.23
CLU1	YMR012W	POF1	P25576	258 aa		1.1	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms