RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	NSE1	Q07913	336 aa		1.16	□□□□□ -2.22
YCS4	YLR272C	FCY22	Q12119	530 aa		1.16	□□□□□ -2.22
YCS4	YLR272C	RNH203	Q12338	110 aa		1.16	□□□□□ -2.22
YCS4	YLR272C	NDJ1	Q12366	352 aa		1.16	□□□□□ -2.22
YCS4	YLR272C	RDS1	P25611	832 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	EFB1	P32471	206 aa	Known RBP	1.15	□□□□□ -2.22
YCS4	YLR272C	PHO89	P38361	574 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	IGD1	P43598	195 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	MRK1	P50873	501 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	YMR102C	Q03177	834 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	RTT109	Q07794	436 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	RKM1	Q08961	583 aa	Predicted RBP	1.15	□□□□□ -2.22
YCS4	YLR272C	AYT1	Q12226	474 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	LAG2	Q92325	660 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	SEY1	Q99287	776 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	PSK1	P31374	1356 aa		1.15	□□□□□ -2.22
YCS4	YLR272C	ARG80	P07249	177 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	UTR1	P21373	530 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	YKL063C	P35725	167 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	GPX2	P38143	162 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	1.15	□□□□□ -2.23	not detected
YCS4	YLR272C	RKM3	P38222	552 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	YNL194C	P40169	301 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	RTT101	P47050	842 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	YPS5	P53057	165 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	SHE10	P53075	577 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	HOP2	P53187	214 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	LST7	P53237	242 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	YNL095C	P53932	642 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	ODC1	Q03028	310 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	BER1	Q06688	274 aa	Known RBP	1.15	□□□□□ -2.23
YCS4	YLR272C	SKI3	P17883	1432 aa	Known RBP	1.15	□□□□□ -2.23
YCS4	YLR272C	KGD2	P19262	463 aa	Predicted RBP	1.15	□□□□□ -2.23
YCS4	YLR272C	RME1	P32338	300 aa	Known RBP	1.15	□□□□□ -2.23
YCS4	YLR272C	CAT2	P32796	670 aa	Known RBP	1.15	□□□□□ -2.23
YCS4	YLR272C	YKL162C	P36052	402 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	BMT2	P38278	337 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	SSH1	P38353	490 aa	Known RBP	1.15	□□□□□ -2.23
YCS4	YLR272C	SEN34	P39707	275 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	CDC1	P40986	491 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	TES1	P41903	349 aa	Known RBP	1.15	□□□□□ -2.23
YCS4	YLR272C	MTM1	P53320	366 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	ENT5	Q03769	411 aa	Known RBP	1.15	□□□□□ -2.23
YCS4	YLR272C	YPR091C	Q06833	770 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	TUS1	Q06412	1307 aa		1.15	□□□□□ -2.23
YCS4	YLR272C	PAN1	P32521	1480 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	HIR3	P47171	1648 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	VPS3	P23643	1011 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	CYM1	P32898	989 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	CSE2	P33308	149 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	SKT5	P34226	696 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	SPT8	P38915	602 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	CCT2	P39076	527 aa	Known RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	TIM17	P39515	158 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	PHO90	P39535	881 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	RPH1	P39956	796 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	CSM2	P40465	213 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	PRM5	P40476	318 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	RPE1	P46969	238 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	SWC4	P53201	476 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	SHY1	P53266	389 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	DPP1	Q05521	289 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	YPR147C	Q06522	304 aa	Known RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	ZWF1	P11412	505 aa	Known RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	FUS3	P16892	353 aa	Known RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	MKK1	P32490	508 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	PDC2	P32896	925 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	MRPL6	P32904	214 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	MLH1	P38920	769 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	VPS41	P38959	992 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	COX15	P40086	486 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	COA1	P40452	197 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	MOB2	P43563	287 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	CSM3	Q04659	317 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	YMR254C	Q04838	102 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	SSQ1	Q05931	657 aa	Predicted RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	STE23	Q06010	1027 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	GMC2	Q06201	188 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	YOR365C	Q08844	703 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	ATX2	Q12067	313 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	1.14	□□□□□ -2.23	not detected
YCS4	YLR272C	PST1	Q12355	444 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	BBP1	Q12365	385 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	1.14	□□□□□ -2.23	not detected
YCS4	YLR272C	RPL23A	P0CX41	137 aa	Known RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	RPL23B	P0CX42	137 aa	Known RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	SNF6	P18888	332 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	PET18	P25362	215 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	TRX3	P25372	127 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	CWP1	P28319	239 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	NUP2	P32499	720 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	ZUO1	P32527	433 aa	Known RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	MRPS5	P33759	307 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	KRE29	P40026	464 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	SHQ1	P40486	507 aa	Predicted RBP	1.14	□□□□□ -2.23
YCS4	YLR272C	YFL040W	P43562	540 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	COX16	P47081	118 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	TAF6	P53040	516 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	URC2	Q04411	772 aa		1.14	□□□□□ -2.23
YCS4	YLR272C	HRI1	Q05905	244 aa	Known RBP	1.14	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms