RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W GAL3P13045 520 aa1.7□□□□□ -2.14
SEC22YLR268W EPT1P22140 391 aa1.7□□□□□ -2.14
SEC22YLR268W RBK1P25332 333 aa1.7□□□□□ -2.14
SEC22YLR268W SPS19P32573 292 aaKnown RBP1.7□□□□□ -2.14
SEC22YLR268W DTR1P38125 572 aa1.7□□□□□ -2.14
SEC22YLR268W ECM34P38728 170 aa1.7□□□□□ -2.14
SEC22YLR268W HCH1P53834 153 aa1.7□□□□□ -2.14
SEC22YLR268W RMI1Q02685 241 aa1.7□□□□□ -2.14
SEC22YLR268W RPN8Q08723 338 aaKnown RBP1.7□□□□□ -2.14
SEC22YLR268W TAF10Q12030 206 aa1.7□□□□□ -2.14
SEC22YLR268W RPN6Q12377 434 aa1.7□□□□□ -2.14
SEC22YLR268W APC2Q12440 853 aa1.7□□□□□ -2.14
SEC22YLR268W TPI1P00942 248 aaKnown RBP1.69□□□□□ -2.14
SEC22YLR268W CTA1P15202 515 aa1.69□□□□□ -2.14
SEC22YLR268W PUT4P15380 627 aa1.69□□□□□ -2.14
SEC22YLR268W BGL2P15703 313 aaKnown RBP1.69□□□□□ -2.14
SEC22YLR268W VMA5P31412 392 aaKnown RBP1.69□□□□□ -2.14
SEC22YLR268W IME2P32581 645 aa1.69□□□□□ -2.14
SEC22YLR268W MMS21P38632 267 aa1.69□□□□□ -2.14
SEC22YLR268W EFM1P38732 585 aa1.69□□□□□ -2.14
SEC22YLR268W GGC1P38988 300 aa1.69□□□□□ -2.14
SEC22YLR268W SSO2P39926 295 aa1.69□□□□□ -2.14
SEC22YLR268W TAF6P53040 516 aa1.69□□□□□ -2.14
SEC22YLR268W YGR168CP53293 376 aa1.69□□□□□ -2.14
SEC22YLR268W PXR1P53335 271 aaPredicted RBP1.69□□□□□ -2.14
SEC22YLR268W NRM1P53718 249 aa1.69□□□□□ -2.14
SEC22YLR268W SCS7Q03529 384 aa1.69□□□□□ -2.14
SEC22YLR268W RVB1Q03940 463 aaKnown RBP1.69□□□□□ -2.14
SEC22YLR268W API2Q04413 109 aa1.69□□□□□ -2.14
SEC22YLR268W REX3Q12090 404 aa1.69□□□□□ -2.14
SEC22YLR268W RTC5Q12108 567 aaKnown RBP1.69□□□□□ -2.14
SEC22YLR268W STE2D6VTK4 431 aa1.68□□□□□ -2.14
SEC22YLR268W ITR2P30606 609 aa1.68□□□□□ -2.14
SEC22YLR268W ACB1P31787 87 aa1.68□□□□□ -2.14
SEC22YLR268W MEI5P32489 222 aa1.68□□□□□ -2.14
SEC22YLR268W SUR1P33300 382 aa1.68□□□□□ -2.14
SEC22YLR268W KTI12P34253 313 aaKnown RBP1.68□□□□□ -2.14
SEC22YLR268W SMP1P38128 452 aa1.68□□□□□ -2.14
SEC22YLR268W SMF2P38778 549 aa1.68□□□□□ -2.14
SEC22YLR268W RRT13P40042 185 aa1.68□□□□□ -2.14
SEC22YLR268W AIM20P40451 204 aa1.68□□□□□ -2.14
SEC22YLR268W YFR018CP43599 363 aa1.68□□□□□ -2.14
SEC22YLR268W HIT1P46973 164 aa1.68□□□□□ -2.14
SEC22YLR268W PRO2P54885 456 aaKnown RBP1.68□□□□□ -2.14
SEC22YLR268W YLR297WQ05899 129 aa1.68□□□□□ -2.14
SEC22YLR268W STE23Q06010 1027 aa1.68□□□□□ -2.14
SEC22YLR268W PIN3Q06449 215 aa1.68□□□□□ -2.14
SEC22YLR268W TIR4Q12218 487 aaPredicted RBP1.68□□□□□ -2.14
SEC22YLR268W VPS63O13549 108 aa1.67□□□□□ -2.14
SEC22YLR268W REP1P03871 373 aa1.67□□□□□ -2.14
SEC22YLR268W CBP2P03874 630 aaPredicted RBP1.67□□□□□ -2.14
SEC22YLR268W PET18P25362 215 aa1.67□□□□□ -2.14
SEC22YLR268W YPS1P32329 569 aa1.67□□□□□ -2.14
SEC22YLR268W CBF5P33322 483 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SEC22YLR268W SWC5P38326 303 aa1.67□□□□□ -2.14
SEC22YLR268W YDR089WP38966 869 aa1.67□□□□□ -2.14
SEC22YLR268W END3P39013 349 aa1.67□□□□□ -2.14
SEC22YLR268W FHL1P39521 936 aa1.67□□□□□ -2.14
SEC22YLR268W INA22P40576 216 aa1.67□□□□□ -2.14
SEC22YLR268W COQ5P49017 307 aa1.67□□□□□ -2.14
SEC22YLR268W SED5Q01590 340 aa1.67□□□□□ -2.14
SEC22YLR268W VPS20Q04272 221 aa1.67□□□□□ -2.14
SEC22YLR268W FAR10Q06001 478 aa1.67□□□□□ -2.14
SEC22YLR268W DTD1Q07648 150 aaKnown RBP1.67□□□□□ -2.14
SEC22YLR268W YOL029CQ08187 201 aa1.67□□□□□ -2.14
SEC22YLR268W RDL2Q08742 149 aaKnown RBP1.67□□□□□ -2.14
SEC22YLR268W SLF1Q12034 447 aaKnown RBP1.67□□□□□ -2.14
SEC22YLR268W YAL067W-AQ8TGK6 75 aa1.67□□□□□ -2.14
SEC22YLR268W MHP1P43638 1398 aa1.67□□□□□ -2.14
SEC22YLR268W SAL1D6W196 494 aa1.66□□□□□ -2.14
SEC22YLR268W RPL18AP0CX49 186 aaKnown RBP1.66□□□□□ -2.14
SEC22YLR268W RPL18BP0CX50 186 aaKnown RBP1.66□□□□□ -2.14
SEC22YLR268W TIP20P33891 701 aa1.66□□□□□ -2.14
SEC22YLR268W TAE1P38340 232 aa1.66□□□□□ -2.14
SEC22YLR268W CTM1P38818 585 aa1.66□□□□□ -2.14
SEC22YLR268W OSW5P40219 148 aa1.66□□□□□ -2.14
SEC22YLR268W UTP25P40498 721 aaKnown RBP1.66□□□□□ -2.14
SEC22YLR268W YGR067CP53243 804 aa1.66□□□□□ -2.14
SEC22YLR268W ABZ2Q03266 374 aa1.66□□□□□ -2.14
SEC22YLR268W CAB5Q03941 241 aa1.66□□□□□ -2.14
SEC22YLR268W MRX9Q07349 420 aaKnown RBP1.66□□□□□ -2.14
SEC22YLR268W YLR012CQ07927 99 aa1.66□□□□□ -2.14
SEC22YLR268W YPR1Q12458 312 aa1.66□□□□□ -2.14
SEC22YLR268W PRM4Q12498 284 aa1.66□□□□□ -2.14
SEC22YLR268W YOL085CQ99345 113 aa1.66□□□□□ -2.14
SEC22YLR268W FLO11P08640 1367 aa1.65□□□□□ -2.15
SEC22YLR268W AUS1Q08409 1394 aa1.65□□□□□ -2.15
SEC22YLR268W GCD2P12754 651 aaPredicted RBP1.65□□□□□ -2.15
SEC22YLR268W SPS100P13130 326 aa1.65□□□□□ -2.15
SEC22YLR268W MSS116P15424 664 aaKnown RBP1.65□□□□□ -2.15
SEC22YLR268W ZIP1P31111 875 aa1.65□□□□□ -2.15
SEC22YLR268W TPS2P31688 896 aaKnown RBP1.65□□□□□ -2.15
SEC22YLR268W RAD23P32628 398 aaKnown RBP1.65□□□□□ -2.15
SEC22YLR268W BUD2P33314 1104 aa1.65□□□□□ -2.15
SEC22YLR268W YKL162CP36052 402 aa1.65□□□□□ -2.15
SEC22YLR268W PES4P39684 611 aa1.65□□□□□ -2.15
SEC22YLR268W PMT4P46971 762 aa1.65□□□□□ -2.15
SEC22YLR268W YPL080CQ02826 108 aa1.65□□□□□ -2.15
SEC22YLR268W IRC4Q03036 179 aa1.65□□□□□ -2.15
SEC22YLR268W UTP15Q04305 513 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms