RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	LAS21	P40367	830 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	SMK1	P41808	388 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	HIT1	P46973	164 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	CPR7	P47103	393 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	AAD10	P47182	288 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	RPL9B	P51401	191 aa	Known RBP	4.92	□□□□□ -1.62
PWP1	YLR196W	FLC3	P53121	802 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	MRH4	P53166	561 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	YGL039W	P53183	348 aa	Known RBP	4.92	□□□□□ -1.62
PWP1	YLR196W	SPC98	P53540	846 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	GPD1	Q00055	391 aa	Known RBP	4.92	□□□□□ -1.62
PWP1	YLR196W	SKO1	Q02100	647 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	BLS1	Q06071	122 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	BER1	Q06688	274 aa	Known RBP	4.92	□□□□□ -1.62
PWP1	YLR196W	MRX9	Q07349	420 aa	Known RBP	4.92	□□□□□ -1.62
PWP1	YLR196W	AIM6	Q07716	390 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	GPM3	Q12326	303 aa		4.92	□□□□□ -1.62
PWP1	YLR196W	DCP1	Q12517	231 aa	Predicted RBP	4.92	□□□□□ -1.62
PWP1	YLR196W	MEX67	Q99257	599 aa	Known RBP	4.92	□□□□□ -1.62
PWP1	YLR196W	SPS2	P08459	502 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	RPS1B	P23248	255 aa	Known RBP	4.91	□□□□□ -1.62
PWP1	YLR196W	HEM12	P32347	362 aa	Predicted RBP	4.91	□□□□□ -1.62
PWP1	YLR196W	AEP1	P32493	518 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PWP1	YLR196W	CYS4	P32582	507 aa	Known RBP	4.91	□□□□□ -1.62
PWP1	YLR196W	ISC10	P32645	267 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PWP1	YLR196W	YSC83	P32792	385 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	UGA4	P32837	571 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	TOD6	P34219	525 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	COS9	P36034	407 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	PHD1	P36093	366 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	TAT1	P38085	619 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	ARN1	P38731	627 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	IPI1	P38803	334 aa	Predicted RBP	4.91	□□□□□ -1.62
PWP1	YLR196W	GPI16	P38875	610 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	AFG3	P39925	761 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	COG3	P40094	801 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	BAP3	P41815	604 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	LSB3	P43603	459 aa	Known RBP	4.91	□□□□□ -1.62
PWP1	YLR196W	YJR011C	P47086	261 aa	Predicted RBP	4.91	□□□□□ -1.62
PWP1	YLR196W	DIA3	P52290	468 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	MRPL22	P53881	309 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	GMC1	Q04399	608 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	RIF2	Q06208	395 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	TPO3	Q06451	622 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	CUR1	Q06469	252 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	BUD20	Q08004	166 aa	Predicted RBP	4.91	□□□□□ -1.62
PWP1	YLR196W	SNX3	Q08826	162 aa	Known RBP	4.91	□□□□□ -1.62
PWP1	YLR196W	TY1A-DR3	Q12441	440 aa		4.91	□□□□□ -1.62
PWP1	YLR196W	SAC7	P17121	654 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
PWP1	YLR196W	MSN1	P22148	382 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	YCL049C	P25577	312 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	SUA7	P29055	345 aa	Predicted RBP	4.9	□□□□□ -1.62
PWP1	YLR196W	TIP20	P33891	701 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	SSS1	P35179	80 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	PDX3	P38075	228 aa	Known RBP	4.9	□□□□□ -1.62
PWP1	YLR196W	HAT2	P39984	401 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	SMB1	P40018	196 aa	Known RBP	4.9	□□□□□ -1.62
PWP1	YLR196W	POG1	P40473	351 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	SEC24	P40482	926 aa	Known RBP	4.9	□□□□□ -1.62
PWP1	YLR196W	QRI7	P43122	407 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	NMA2	P53204	395 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	TAM41	P53230	385 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	YGR126W	P53274	230 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	NUP49	Q02199	472 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	YPL077C	Q02831	240 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	SHH3	Q04487	196 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	EMG1	Q06287	252 aa	Known RBP	4.9	□□□□□ -1.62
PWP1	YLR196W	YET3	Q07451	203 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	SLF1	Q12034	447 aa	Known RBP	4.9	□□□□□ -1.62
PWP1	YLR196W	TMS1	Q12116	473 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	NMD4	Q12129	218 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	RKI1	Q12189	258 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	TPO4	Q12256	659 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	YLR108C	Q12259	485 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	SLO1	Q3E784	85 aa		4.9	□□□□□ -1.62
PWP1	YLR196W	CAN1	P04817	590 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	TPK2	P06245	380 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	PPA2	P28239	310 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	UGX2	P32772	223 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	SLC1	P33333	303 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	YPC1	P38298	316 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	VPS52	P39904	641 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	HEM14	P40012	539 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	JHD1	P40034	492 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	PGD1	P40356	397 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	FIS1	P40515	155 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	YJL107C	P42947	387 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	YJL045W	P47052	634 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	AVT4	P50944	713 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	COS10	P52924	374 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	YNL140C	P53910	189 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	ROD1	Q02805	837 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	YDR132C	Q03900	495 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	TMN2	Q04562	672 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	YDR344C	Q05510	147 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	YPS7	Q06325	596 aa		4.89	□□□□□ -1.63
PWP1	YLR196W	ACK1	Q07622	623 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms