RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W OKP1P53298 406 aa4.02□□□□□ -1.77
SIR1YKR101W SLM3Q12093 417 aa4.02□□□□□ -1.77
SIR1YKR101W MEX67Q99257 599 aaKnown RBP4.02□□□□□ -1.77
SIR1YKR101W RPS8AP0CX39 200 aaKnown RBP4.01□□□□□ -1.77
SIR1YKR101W RPS8BP0CX40 200 aaKnown RBP4.01□□□□□ -1.77
SIR1YKR101W RCY1P39531 840 aa4.01□□□□□ -1.77
SIR1YKR101W YIL029CP40538 142 aa4.01□□□□□ -1.77
SIR1YKR101W YJR085CP47131 105 aaKnown RBP4.01□□□□□ -1.77
SIR1YKR101W LSG1P53145 640 aaKnown RBP4.01□□□□□ -1.77
SIR1YKR101W YPL080CQ02826 108 aa4.01□□□□□ -1.77
SIR1YKR101W YMR102CQ03177 834 aa4.01□□□□□ -1.77
SIR1YKR101W DAL2P25335 343 aa4□□□□□ -1.77
SIR1YKR101W SPO23P33757 523 aa4□□□□□ -1.77
SIR1YKR101W YKR015CP36111 568 aa4□□□□□ -1.77
SIR1YKR101W AVT5P38176 459 aa4□□□□□ -1.77
SIR1YKR101W YFL067WP43537 175 aa4□□□□□ -1.77
SIR1YKR101W WWM1P43582 211 aaKnown RBP4□□□□□ -1.77
SIR1YKR101W AIM24P47127 394 aa4□□□□□ -1.77
SIR1YKR101W BCP1Q06338 283 aa4□□□□□ -1.77
SIR1YKR101W PBP4Q07362 185 aaKnown RBP4□□□□□ -1.77
SIR1YKR101W SAM4Q08985 325 aaKnown RBP4□□□□□ -1.77
SIR1YKR101W TMS1Q12116 473 aa4□□□□□ -1.77
SIR1YKR101W ICT1Q12385 394 aa4□□□□□ -1.77
SIR1YKR101W PIS1P06197 220 aaKnown RBP4□□□□□ -1.77
SIR1YKR101W TMT1P32643 299 aa4□□□□□ -1.77
SIR1YKR101W IMP3P32899 183 aaPredicted RBP4□□□□□ -1.77
SIR1YKR101W ATC1Q04005 294 aa4□□□□□ -1.77
SIR1YKR101W NDE2Q07500 545 aa4□□□□□ -1.77
SIR1YKR101W FCY22Q12119 530 aa4□□□□□ -1.77
SIR1YKR101W SIA1Q12212 622 aa4□□□□□ -1.77
SIR1YKR101W YOL107WQ12239 342 aa4□□□□□ -1.77
SIR1YKR101W RPN6Q12377 434 aa4□□□□□ -1.77
SIR1YKR101W EAF3Q12432 401 aa4□□□□□ -1.77
SIR1YKR101W RAD7P06779 565 aa3.99□□□□□ -1.77
SIR1YKR101W RSR1P13856 272 aa3.99□□□□□ -1.77
SIR1YKR101W COY1P34237 679 aa3.99□□□□□ -1.77
SIR1YKR101W ECM8P38246 354 aa3.99□□□□□ -1.77
SIR1YKR101W YMR262WP38430 313 aa3.99□□□□□ -1.77
SIR1YKR101W PET100P38958 111 aa3.99□□□□□ -1.77
SIR1YKR101W YPR091CQ06833 770 aa3.99□□□□□ -1.77
SIR1YKR101W LOT6Q07923 191 aa3.99□□□□□ -1.77
SIR1YKR101W ESA1Q08649 445 aa3.99□□□□□ -1.77
SIR1YKR101W YGK3Q12222 375 aaPredicted RBP3.99□□□□□ -1.77
SIR1YKR101W UBA3Q99344 299 aa3.99□□□□□ -1.77
SIR1YKR101W TDH3P00359 332 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
SIR1YKR101W FUN26P31381 517 aa3.98□□□□□ -1.77
SIR1YKR101W ACB1P31787 87 aa3.98□□□□□ -1.77
SIR1YKR101W RAD5P32849 1169 aaPredicted RBP3.98□□□□□ -1.77
SIR1YKR101W HEM14P40012 539 aa3.98□□□□□ -1.77
SIR1YKR101W YNL134CP53912 376 aaKnown RBP3.98□□□□□ -1.77
SIR1YKR101W SPP2Q02521 185 aa3.98□□□□□ -1.77
SIR1YKR101W TSR1Q07381 788 aaKnown RBP3.98□□□□□ -1.77
SIR1YKR101W SMC5Q08204 1093 aa3.98□□□□□ -1.77
SIR1YKR101W YPQ1Q12010 308 aa3.98□□□□□ -1.77
SIR1YKR101W USO1P25386 1790 aa3.98□□□□□ -1.77
SIR1YKR101W POL30P15873 258 aaKnown RBP3.98□□□□□ -1.77
SIR1YKR101W POP5P28005 173 aa3.98□□□□□ -1.77
SIR1YKR101W ICL1P28240 557 aaPredicted RBP3.98□□□□□ -1.77
SIR1YKR101W HSM3P38348 480 aa3.98□□□□□ -1.77
SIR1YKR101W HIS2P38635 335 aa3.98□□□□□ -1.77
SIR1YKR101W SPT8P38915 602 aa3.98□□□□□ -1.77
SIR1YKR101W YJL118WP47022 219 aa3.98□□□□□ -1.77
SIR1YKR101W SEH1P53011 349 aaKnown RBP3.98□□□□□ -1.77
SIR1YKR101W LSB1P53281 241 aa3.98□□□□□ -1.77
SIR1YKR101W FRE8Q12209 686 aa3.98□□□□□ -1.77
SIR1YKR101W PCL9Q12477 304 aa3.98□□□□□ -1.77
SIR1YKR101W RCK2P38623 610 aa3.97□□□□□ -1.77
SIR1YKR101W CTM1P38818 585 aa3.97□□□□□ -1.77
SIR1YKR101W KRE9P39005 276 aa3.97□□□□□ -1.77
SIR1YKR101W YGR210CP42942 411 aa3.97□□□□□ -1.77
SIR1YKR101W LSC1P53598 329 aaKnown RBP3.97□□□□□ -1.77
SIR1YKR101W TRM82Q03774 444 aa3.97□□□□□ -1.77
SIR1YKR101W PRM6Q04705 352 aa3.97□□□□□ -1.77
SIR1YKR101W COX20Q04935 205 aa3.97□□□□□ -1.77
SIR1YKR101W YHC1Q05900 231 aaKnown RBP3.97□□□□□ -1.77
SIR1YKR101W YLR173WQ06247 608 aa3.97□□□□□ -1.77
SIR1YKR101W MFG1Q07684 458 aa3.97□□□□□ -1.77
SIR1YKR101W YOR387CQ08910 206 aa3.97□□□□□ -1.77
SIR1YKR101W SLF1Q12034 447 aaKnown RBP3.97□□□□□ -1.77
SIR1YKR101W YDL199CQ12407 687 aa3.97□□□□□ -1.77
SIR1YKR101W RPL16AP26784 199 aaKnown RBP3.96□□□□□ -1.77
SIR1YKR101W COS9P36034 407 aa3.96□□□□□ -1.77
SIR1YKR101W COX16P47081 118 aa3.96□□□□□ -1.77
SIR1YKR101W CWC25P53854 179 aaKnown RBP3.96□□□□□ -1.77
SIR1YKR101W YDL114WQ07530 308 aa3.96□□□□□ -1.77
SIR1YKR101W APC9Q12107 265 aa3.96□□□□□ -1.77
SIR1YKR101W TY3B-IQ7LHG5 1498 aaKnown RBP3.96□□□□□ -1.78
SIR1YKR101W RPS14AP06367 137 aaKnown RBP3.96□□□□□ -1.78
SIR1YKR101W MSF1P08425 469 aa3.96□□□□□ -1.78
SIR1YKR101W RPL23AP0CX41 137 aaKnown RBP3.96□□□□□ -1.78
SIR1YKR101W RPL23BP0CX42 137 aaKnown RBP3.96□□□□□ -1.78
SIR1YKR101W PMT2P31382 759 aa3.96□□□□□ -1.78
SIR1YKR101W RPS14BP39516 138 aaKnown RBP3.96□□□□□ -1.78
SIR1YKR101W PTI1P39927 425 aaPredicted RBP3.96□□□□□ -1.78
SIR1YKR101W IRC4Q03036 179 aa3.96□□□□□ -1.78
SIR1YKR101W RTN1Q04947 295 aaKnown RBP3.96□□□□□ -1.78
SIR1YKR101W GRS2Q06817 618 aa3.96□□□□□ -1.78
SIR1YKR101W NDD1Q08887 554 aa3.96□□□□□ -1.78
SIR1YKR101W SGT2Q12118 346 aaKnown RBP3.96□□□□□ -1.78
SIR1YKR101W MCT1Q12283 360 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms