RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	SAF1	P38352	637 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	YHR122W	P38829	231 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	PLB1	P39105	664 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	CEM1	P39525	442 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	AVT6	P40074	448 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	SER33	P40510	469 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	GTT1	P40582	234 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	OPT1	P40897	799 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	FMP32	P43557	207 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	PHO86	P46956	311 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	ROG1	P53118	685 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	VPS62	P53285	467 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	ASI2	P53895	289 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	APM1	Q00776	475 aa	Predicted RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	RIM13	Q03792	727 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	AIM33	Q04516	312 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	BUR2	Q05949	395 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	YLR177W	Q06251	628 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	MRPL35	Q06678	367 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	POS5	Q06892	414 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	AFT2	Q08957	416 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	PKH2	Q12236	1081 aa	Known RBP	4.15	□□□□□ -1.75
AVT1	YJR001W	YOR214C	Q12282	236 aa		4.15	□□□□□ -1.75
AVT1	YJR001W	YOR304C-A	O14468	76 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	RHO1	P06780	209 aa	Known RBP	4.14	□□□□□ -1.75
AVT1	YJR001W	ERG11	P10614	530 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	SAC7	P17121	654 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	CLB2	P24869	491 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	YCR015C	P25616	317 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	HRR25	P29295	494 aa	Known RBP	4.14	□□□□□ -1.75
AVT1	YJR001W	UPS2	P35200	230 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	JEN1	P36035	616 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	DER1	P38307	211 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	SRP14	P38985	146 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	POG1	P40473	351 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	IDP2	P41939	412 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	SPG5	P42933	373 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	GET1	P53192	235 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	RSM27	P53305	110 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	PAL1	Q05518	499 aa	Known RBP	4.14	□□□□□ -1.75
AVT1	YJR001W	FRQ1	Q06389	190 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	RRP42	Q12277	265 aa	Predicted RBP	4.14	□□□□□ -1.75
AVT1	YJR001W	EFG1	Q3E705	233 aa	Known RBP	4.14	□□□□□ -1.75
AVT1	YJR001W	AAC1	P04710	309 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	SPS4	P09937	338 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	RPL24B	P24000	155 aa	Known RBP	4.14	□□□□□ -1.75
AVT1	YJR001W	PRR1	P28708	518 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	PRP18	P33411	251 aa	Predicted RBP	4.14	□□□□□ -1.75
AVT1	YJR001W	TRM2	P33753	639 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	SHP1	P34223	423 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	COS9	P36034	407 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	LDB7	P38210	180 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	POP4	P38336	279 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	GPI16	P38875	610 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	CFD1	P40558	293 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	HXT9	P40885	567 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	FAR3	P46671	204 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	TAX4	P47030	604 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	YJL016W	P47072	561 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	COS1	P53822	381 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	HXT11	P54862	567 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	SPP2	Q02521	185 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	TRM82	Q03774	444 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	PSF1	Q12488	208 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	RMD5	Q12508	421 aa		4.14	□□□□□ -1.75
AVT1	YJR001W	HRP1	Q99383	534 aa	Known RBP	4.14	□□□□□ -1.75
AVT1	YJR001W	RPL18A	P0CX49	186 aa	Known RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	RPL18B	P0CX50	186 aa	Known RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	SKG6	P32900	734 aa	Predicted RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	SIP2	P34164	415 aa	Known RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	TSA1	P34760	196 aa	Known RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	NTR2	P36118	322 aa	Predicted RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	SKG1	P36169	355 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	NAT2	P37293	288 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	RIB1	P38066	345 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	PFS1	P38872	237 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	ERV46	P39727	415 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	GET2	P40056	285 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	SER2	P42941	309 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	SNG1	P46950	547 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	YGL108C	P53139	140 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	NOP19	P53317	196 aa	Predicted RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	SPC98	P53540	846 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	TRM112	P53738	135 aa	Predicted RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	CAF40	P53829	373 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	ATG4	P53867	494 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	YNL140C	P53910	189 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	SNU56	Q03782	492 aa	Known RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	YMR310C	Q04867	317 aa	Predicted RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	RIB2	Q12362	591 aa	Known RBP	4.13	□□□□□ -1.75
AVT1	YJR001W	MRX4	Q12467	430 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	YLR361C-A	Q3E795	98 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	UBA3	Q99344	299 aa		4.13	□□□□□ -1.75
AVT1	YJR001W	YLR415C	O13578	112 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	GDH1	P07262	454 aa	Known RBP	4.12	□□□□□ -1.75
AVT1	YJR001W	MRP1	P10662	321 aa	Known RBP	4.12	□□□□□ -1.75
AVT1	YJR001W	MAS2	P11914	482 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	STF2	P16965	84 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	STE18	P18852	110 aa		4.12	□□□□□ -1.75
AVT1	YJR001W	MSS51	P32335	436 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms