RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C DEP1P31385 405 aa1.81□□□□□ -2.12
VPS35YJL154C IES6P32617 166 aa1.81□□□□□ -2.12
VPS35YJL154C BUD2P33314 1104 aa1.81□□□□□ -2.12
VPS35YJL154C KDX1P36005 433 aa1.81□□□□□ -2.12
VPS35YJL154C PEX32P38292 413 aa1.81□□□□□ -2.12
VPS35YJL154C DED81P38707 554 aaKnown RBP1.81□□□□□ -2.12
VPS35YJL154C WSC4P38739 605 aa1.81□□□□□ -2.12
VPS35YJL154C EGT2P42835 1041 aa1.81□□□□□ -2.12
VPS35YJL154C SHY1P53266 389 aa1.81□□□□□ -2.12
VPS35YJL154C RRN9P53437 365 aa1.81□□□□□ -2.12
VPS35YJL154C BUR2Q05949 395 aa1.81□□□□□ -2.12
VPS35YJL154C YOR012WQ12351 137 aa1.81□□□□□ -2.12
VPS35YJL154C YIL002W-AQ3E7Z5 69 aa1.81□□□□□ -2.12
VPS35YJL154C RNR2P09938 399 aaKnown RBP1.81□□□□□ -2.12
VPS35YJL154C SAG1P20840 650 aa1.81□□□□□ -2.12
VPS35YJL154C HXT2P23585 541 aa1.81□□□□□ -2.12
VPS35YJL154C ASF2P32448 525 aaPredicted RBP1.81□□□□□ -2.12
VPS35YJL154C SPO23P33757 523 aa1.81□□□□□ -2.12
VPS35YJL154C SRB2P34162 210 aa1.81□□□□□ -2.12
VPS35YJL154C YKT6P36015 200 aaKnown RBP1.81□□□□□ -2.12
VPS35YJL154C SWD3P38123 315 aa1.81□□□□□ -2.12
VPS35YJL154C VPS45P38932 577 aa1.81□□□□□ -2.12
VPS35YJL154C PRP39P39682 629 aaKnown RBP1.81□□□□□ -2.12
VPS35YJL154C UTP18P40362 594 aaPredicted RBP1.81□□□□□ -2.12
VPS35YJL154C INA22P40576 216 aa1.81□□□□□ -2.12
VPS35YJL154C YNL320WP42840 284 aa1.81□□□□□ -2.12
VPS35YJL154C EFM5P53200 248 aaKnown RBP1.81□□□□□ -2.12
VPS35YJL154C NOP6Q07623 225 aaKnown RBP1.81□□□□□ -2.12
VPS35YJL154C ADF1Q2V2Q1 113 aa1.81□□□□□ -2.12
VPS35YJL154C YBL111CQ3E7Y5 667 aa1.81□□□□□ -2.12
VPS35YJL154C FMP27Q06179 2628 aa1.8□□□□□ -2.12
VPS35YJL154C ADH2P00331 348 aaKnown RBP1.8□□□□□ -2.12
VPS35YJL154C RPS18AP0CX55 146 aaKnown RBP1.8□□□□□ -2.12
VPS35YJL154C RPS18BP0CX56 146 aaPredicted RBP1.8□□□□□ -2.12
VPS35YJL154C ARF2P19146 181 aaKnown RBP1.8□□□□□ -2.12
VPS35YJL154C COS9P36034 407 aa1.8□□□□□ -2.12
VPS35YJL154C YPT35P38815 214 aaKnown RBP1.8□□□□□ -2.12
VPS35YJL154C END3P39013 349 aa1.8□□□□□ -2.12
VPS35YJL154C ALD5P40047 520 aaKnown RBP1.8□□□□□ -2.12
VPS35YJL154C YNL050CP53952 270 aa1.8□□□□□ -2.12
VPS35YJL154C FSH2Q05015 223 aa1.8□□□□□ -2.12
VPS35YJL154C YDL109CQ12103 647 aa1.8□□□□□ -2.12
VPS35YJL154C YDL199CQ12407 687 aa1.8□□□□□ -2.12
VPS35YJL154C SPO24Q3E752 67 aa1.8□□□□□ -2.12
VPS35YJL154C MHP1P43638 1398 aa1.8□□□□□ -2.12
VPS35YJL154C CKI1P20485 582 aa1.8□□□□□ -2.12
VPS35YJL154C PCH2P38126 564 aa1.8□□□□□ -2.12
VPS35YJL154C MIG3P39943 394 aa1.8□□□□□ -2.12
VPS35YJL154C DNL4Q08387 944 aaPredicted RBP1.8□□□□□ -2.12
VPS35YJL154C UBA3Q99344 299 aa1.8□□□□□ -2.12
VPS35YJL154C RAD9P14737 1309 aa1.79□□□□□ -2.12
VPS35YJL154C CIN8P27895 1000 aa1.79□□□□□ -2.12
VPS35YJL154C FUN26P31381 517 aa1.79□□□□□ -2.12
VPS35YJL154C DOA4P32571 926 aa1.79□□□□□ -2.12
VPS35YJL154C SUR1P33300 382 aa1.79□□□□□ -2.12
VPS35YJL154C CBF5P33322 483 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
VPS35YJL154C SOL2P37262 315 aa1.79□□□□□ -2.12
VPS35YJL154C LSM12P38828 187 aaKnown RBP1.79□□□□□ -2.12
VPS35YJL154C OSW5P40219 148 aa1.79□□□□□ -2.12
VPS35YJL154C KEG1P43614 200 aa1.79□□□□□ -2.12
VPS35YJL154C RTC4P53850 401 aa1.79□□□□□ -2.12
VPS35YJL154C GIM3P53900 129 aa1.79□□□□□ -2.12
VPS35YJL154C MGR3Q04472 501 aa1.79□□□□□ -2.12
VPS35YJL154C GAS2Q06135 555 aa1.79□□□□□ -2.12
VPS35YJL154C GAT3Q07928 141 aa1.79□□□□□ -2.12
VPS35YJL154C FDH1Q08911 376 aa1.79□□□□□ -2.12
VPS35YJL154C RTC5Q12108 567 aaKnown RBP1.79□□□□□ -2.12
VPS35YJL154C RBD2Q12270 262 aa1.79□□□□□ -2.12
VPS35YJL154C IKI3Q06706 1349 aaKnown RBP1.79□□□□□ -2.12
VPS35YJL154C JIP3O13555 125 aa1.79□□□□□ -2.12
VPS35YJL154C STE7P06784 515 aa1.79□□□□□ -2.12
VPS35YJL154C LDS1P31379 325 aa1.79□□□□□ -2.12
VPS35YJL154C TOA2P32774 122 aa1.79□□□□□ -2.12
VPS35YJL154C VAM7P32912 316 aa1.79□□□□□ -2.12
VPS35YJL154C ECM4P36156 370 aa1.79□□□□□ -2.12
VPS35YJL154C LCP5P40079 357 aaPredicted RBP1.79□□□□□ -2.12
VPS35YJL154C GAB1P41733 394 aa1.79□□□□□ -2.12
VPS35YJL154C EFM3P47163 339 aa1.79□□□□□ -2.12
VPS35YJL154C LST7P53237 242 aa1.79□□□□□ -2.12
VPS35YJL154C YET2Q04210 160 aa1.79□□□□□ -2.12
VPS35YJL154C NAT4Q04751 285 aa1.79□□□□□ -2.12
VPS35YJL154C YLR297WQ05899 129 aa1.79□□□□□ -2.12
VPS35YJL154C KAP95Q06142 861 aaKnown RBP1.79□□□□□ -2.12
VPS35YJL154C YPR078CQ06813 372 aa1.79□□□□□ -2.12
VPS35YJL154C MCH1Q07376 486 aa1.79□□□□□ -2.12
VPS35YJL154C MDY2Q12285 212 aa1.79□□□□□ -2.12
VPS35YJL154C SFG1Q12507 346 aa1.79□□□□□ -2.12
VPS35YJL154C HEM4P06174 275 aa1.78□□□□□ -2.12
VPS35YJL154C GRR1P24814 1151 aa1.78□□□□□ -2.12
VPS35YJL154C RBK1P25332 333 aa1.78□□□□□ -2.12
VPS35YJL154C NUP2P32499 720 aa1.78□□□□□ -2.12
VPS35YJL154C YKR015CP36111 568 aa1.78□□□□□ -2.12
VPS35YJL154C PFS1P38872 237 aa1.78□□□□□ -2.12
VPS35YJL154C GCN20P43535 752 aaKnown RBP1.78□□□□□ -2.12
VPS35YJL154C ATG18P43601 500 aa1.78□□□□□ -2.12
VPS35YJL154C HCH1P53834 153 aa1.78□□□□□ -2.12
VPS35YJL154C ARP5P53946 755 aa1.78□□□□□ -2.12
VPS35YJL154C MSC3Q05812 728 aa1.78□□□□□ -2.12
VPS35YJL154C RRT8Q08219 342 aa1.78□□□□□ -2.12
VPS35YJL154C GSC2P40989 1895 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms