RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W MSN4P33749 630 aa7.84□□□□□ -1.15
CPD1YGR247W NUF2P33895 451 aa7.84□□□□□ -1.15
CPD1YGR247W JEN1P36035 616 aa7.84□□□□□ -1.15
CPD1YGR247W PIG2P40187 538 aa7.84□□□□□ -1.15
CPD1YGR247W YIR020CP40575 100 aa7.84□□□□□ -1.15
CPD1YGR247W YPR127WQ06494 345 aa7.84□□□□□ -1.15
CPD1YGR247W VPS36Q06696 566 aa7.84□□□□□ -1.15
CPD1YGR247W YDL176WQ12027 708 aa7.84□□□□□ -1.15
CPD1YGR247W CAM1P29547 415 aaKnown RBP7.83□□□□□ -1.16
CPD1YGR247W ECM15P35195 104 aa7.83□□□□□ -1.16
CPD1YGR247W CUE2P36075 443 aaKnown RBP7.83□□□□□ -1.16
CPD1YGR247W PEX18P38855 283 aa7.83□□□□□ -1.16
CPD1YGR247W RSP5P39940 809 aaKnown RBP7.83□□□□□ -1.16
CPD1YGR247W YEL068CP39977 110 aa7.83□□□□□ -1.16
CPD1YGR247W GCN20P43535 752 aaKnown RBP7.83□□□□□ -1.16
CPD1YGR247W TRS85P46944 698 aa7.83□□□□□ -1.16
CPD1YGR247W MTM1P53320 366 aa7.83□□□□□ -1.16
CPD1YGR247W LAP3Q01532 483 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
CPD1YGR247W SED1Q01589 338 aa7.83□□□□□ -1.16
CPD1YGR247W THP1Q08231 455 aa7.83□□□□□ -1.16
CPD1YGR247W RNH203Q12338 110 aa7.83□□□□□ -1.16
CPD1YGR247W YOL087CQ99247 1116 aa7.83□□□□□ -1.16
CPD1YGR247W SPO7P18410 259 aa7.82□□□□□ -1.16
CPD1YGR247W GIT1P25346 518 aa7.82□□□□□ -1.16
CPD1YGR247W ATP7P30902 174 aa7.82□□□□□ -1.16
CPD1YGR247W RFC3P38629 340 aa7.82□□□□□ -1.16
CPD1YGR247W ERP5P38819 212 aa7.82□□□□□ -1.16
CPD1YGR247W GDI1P39958 451 aaKnown RBP7.82□□□□□ -1.16
CPD1YGR247W HPM1P40481 377 aa7.82□□□□□ -1.16
CPD1YGR247W EGT2P42835 1041 aa7.82□□□□□ -1.16
CPD1YGR247W CAK1P43568 368 aaPredicted RBP7.82□□□□□ -1.16
CPD1YGR247W NCA3P46955 337 aa7.82□□□□□ -1.16
CPD1YGR247W YGL235WP53071 178 aa7.82□□□□□ -1.16
CPD1YGR247W COG2P53271 262 aa7.82□□□□□ -1.16
CPD1YGR247W TPS1Q00764 495 aaKnown RBP7.82□□□□□ -1.16
CPD1YGR247W YKR011CQ02209 353 aa7.82□□□□□ -1.16
CPD1YGR247W SVL3Q03088 825 aaKnown RBP7.82□□□□□ -1.16
CPD1YGR247W RNH202Q05635 350 aa7.82□□□□□ -1.16
CPD1YGR247W MUM3Q08750 479 aa7.82□□□□□ -1.16
CPD1YGR247W YDL199CQ12407 687 aa7.82□□□□□ -1.16
CPD1YGR247W YER145C-AA0A023PYF4 145 aa7.81□□□□□ -1.16
CPD1YGR247W RPS16AP0CX51 143 aaKnown RBP7.81□□□□□ -1.16
CPD1YGR247W RPS16BP0CX52 143 aaKnown RBP7.81□□□□□ -1.16
CPD1YGR247W CNA1P23287 553 aa7.81□□□□□ -1.16
CPD1YGR247W HBS1P32769 611 aaKnown RBP7.81□□□□□ -1.16
CPD1YGR247W TOA1P32773 286 aa7.81□□□□□ -1.16
CPD1YGR247W YKL071WP36086 256 aa7.81□□□□□ -1.16
CPD1YGR247W RCY1P39531 840 aa7.81□□□□□ -1.16
CPD1YGR247W DPB11P47027 764 aaPredicted RBP7.81□□□□□ -1.16
CPD1YGR247W ABM1P47146 123 aa7.81□□□□□ -1.16
CPD1YGR247W IMD4P50094 524 aaKnown RBP7.81□□□□□ -1.16
CPD1YGR247W MEP3P53390 489 aa7.81□□□□□ -1.16
CPD1YGR247W YNR062CP53748 327 aa7.81□□□□□ -1.16
CPD1YGR247W SEC13Q04491 297 aaKnown RBP7.81□□□□□ -1.16
CPD1YGR247W YPR202WQ08993 238 aa7.81□□□□□ -1.16
CPD1YGR247W RTR2Q12378 196 aa7.81□□□□□ -1.16
CPD1YGR247W APC2Q12440 853 aa7.81□□□□□ -1.16
CPD1YGR247W MRX4Q12467 430 aa7.81□□□□□ -1.16
CPD1YGR247W TSC13Q99190 310 aa7.81□□□□□ -1.16
CPD1YGR247W UGA1P17649 471 aa7.8□□□□□ -1.16
CPD1YGR247W MDH3P32419 343 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
CPD1YGR247W MNS1P32906 549 aa7.8□□□□□ -1.16
CPD1YGR247W HCS1P34243 683 aa7.8□□□□□ -1.16
CPD1YGR247W YER188WP40103 239 aa7.8□□□□□ -1.16
CPD1YGR247W NIT3P49954 291 aa7.8□□□□□ -1.16
CPD1YGR247W PET191Q02772 108 aa7.8□□□□□ -1.16
CPD1YGR247W YDR102CQ03864 110 aa7.8□□□□□ -1.16
CPD1YGR247W RSM24Q03976 319 aa7.8□□□□□ -1.16
CPD1YGR247W PSR1Q07800 427 aa7.8□□□□□ -1.16
CPD1YGR247W FIT3Q08907 204 aa7.8□□□□□ -1.16
CPD1YGR247W ULA1Q12059 462 aa7.8□□□□□ -1.16
CPD1YGR247W RDL1Q12305 139 aaKnown RBP7.8□□□□□ -1.16
CPD1YGR247W HMS1Q12398 434 aa7.8□□□□□ -1.16
CPD1YGR247W HAP4P14064 554 aa7.79□□□□□ -1.16
CPD1YGR247W PET9P18239 318 aaKnown RBP7.79□□□□□ -1.16
CPD1YGR247W RER1P25560 188 aa7.79□□□□□ -1.16
CPD1YGR247W DGR2P32330 852 aa7.79□□□□□ -1.16
CPD1YGR247W CLB6P32943 380 aa7.79□□□□□ -1.16
CPD1YGR247W NAB3P38996 802 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
CPD1YGR247W YER121WP40076 114 aa7.79□□□□□ -1.16
CPD1YGR247W IRC7P43623 340 aa7.79□□□□□ -1.16
CPD1YGR247W UBC13P52490 153 aa7.79□□□□□ -1.16
CPD1YGR247W BRR6P53062 197 aa7.79□□□□□ -1.16
CPD1YGR247W DUG3P53871 357 aa7.79□□□□□ -1.16
CPD1YGR247W UBP2Q01476 1272 aa7.79□□□□□ -1.16
CPD1YGR247W CIK1Q01649 594 aa7.79□□□□□ -1.16
CPD1YGR247W UGO1Q03327 502 aa7.79□□□□□ -1.16
CPD1YGR247W SKI7Q08491 747 aaPredicted RBP7.79□□□□□ -1.16
CPD1YGR247W RPS23AP0CX29 145 aaKnown RBP7.78□□□□□ -1.16
CPD1YGR247W RPS23BP0CX30 145 aa7.78□□□□□ -1.16
CPD1YGR247W URE2P23202 354 aaKnown RBP7.78□□□□□ -1.16
CPD1YGR247W ERG4P25340 473 aa7.78□□□□□ -1.16
CPD1YGR247W YCR100CP25606 316 aa7.78□□□□□ -1.16
CPD1YGR247W PRE2P30656 287 aaKnown RBP7.78□□□□□ -1.16
CPD1YGR247W RPN2P32565 945 aaKnown RBP7.78□□□□□ -1.16
CPD1YGR247W PUB1P32588 453 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16 RIP-Chip
CPD1YGR247W RPP1P38786 293 aa7.78□□□□□ -1.16
CPD1YGR247W ALP1P38971 573 aa7.78□□□□□ -1.16
CPD1YGR247W ISC1P40015 477 aaKnown RBP7.78□□□□□ -1.16
CPD1YGR247W USE1P53146 245 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms