RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W YBR241CP38142 488 aa3.75□□□□□ -1.81
PTR3YFR029W NPT1P39683 429 aaKnown RBP3.75□□□□□ -1.81
PTR3YFR029W SEO1P39709 593 aa3.75□□□□□ -1.81
PTR3YFR029W HAT2P39984 401 aa3.75□□□□□ -1.81
PTR3YFR029W SHO1P40073 367 aa3.75□□□□□ -1.81
PTR3YFR029W PRM10P42946 383 aa3.75□□□□□ -1.81
PTR3YFR029W SFH5P47008 294 aa3.75□□□□□ -1.81
PTR3YFR029W YJR079WP47126 109 aa3.75□□□□□ -1.81
PTR3YFR029W NQM1P53228 333 aaPredicted RBP3.75□□□□□ -1.81
PTR3YFR029W COG2P53271 262 aa3.75□□□□□ -1.81
PTR3YFR029W YMR114CQ04471 368 aaKnown RBP3.75□□□□□ -1.81
PTR3YFR029W PER33Q12144 273 aa3.75□□□□□ -1.81
PTR3YFR029W ERP3Q12403 225 aa3.75□□□□□ -1.81
PTR3YFR029W HEM2P05373 342 aa3.75□□□□□ -1.81
PTR3YFR029W RPS13P05756 151 aaKnown RBP3.75□□□□□ -1.81
PTR3YFR029W NUP1P20676 1076 aa3.75□□□□□ -1.81
PTR3YFR029W CLB2P24869 491 aa3.75□□□□□ -1.81
PTR3YFR029W RPS2P25443 254 aaKnown RBP3.75□□□□□ -1.81
PTR3YFR029W POF1P25576 258 aa3.75□□□□□ -1.81
PTR3YFR029W NAM9P27929 486 aa3.75□□□□□ -1.81
PTR3YFR029W CSE1P33307 960 aa3.75□□□□□ -1.81
PTR3YFR029W YER137CP40083 148 aaKnown RBP3.75□□□□□ -1.81
PTR3YFR029W IDP2P41939 412 aa3.75□□□□□ -1.81
PTR3YFR029W YFL015CP43578 164 aa3.75□□□□□ -1.81
PTR3YFR029W YJR111CP47148 283 aaKnown RBP3.75□□□□□ -1.81
PTR3YFR029W PHB2P50085 310 aa3.75□□□□□ -1.81
PTR3YFR029W YPT32P51996 222 aaKnown RBP3.75□□□□□ -1.81
PTR3YFR029W YGR042WP53227 271 aa3.75□□□□□ -1.81
PTR3YFR029W ECM5Q03214 1411 aa3.75□□□□□ -1.81
PTR3YFR029W SLD5Q03406 294 aa3.75□□□□□ -1.81
PTR3YFR029W DET1Q99288 334 aaKnown RBP3.75□□□□□ -1.81
PTR3YFR029W BAR1P12630 587 aa3.74□□□□□ -1.81
PTR3YFR029W RPB8P20436 146 aa3.74□□□□□ -1.81
PTR3YFR029W MNS1P32906 549 aa3.74□□□□□ -1.81
PTR3YFR029W ATO2P32907 282 aa3.74□□□□□ -1.81
PTR3YFR029W MCH2P36032 473 aa3.74□□□□□ -1.81
PTR3YFR029W SWD2P36104 329 aaPredicted RBP3.74□□□□□ -1.81
PTR3YFR029W DER1P38307 211 aa3.74□□□□□ -1.81
PTR3YFR029W SSH1P38353 490 aaKnown RBP3.74□□□□□ -1.81
PTR3YFR029W OSH3P38713 996 aaKnown RBP3.74□□□□□ -1.81
PTR3YFR029W DDI1P40087 428 aa3.74□□□□□ -1.81
PTR3YFR029W SIM1P40472 476 aa3.74□□□□□ -1.81
PTR3YFR029W IRC24P40580 263 aa3.74□□□□□ -1.81
PTR3YFR029W PMT6P42934 759 aa3.74□□□□□ -1.81
PTR3YFR029W NSG2P53898 299 aa3.74□□□□□ -1.81
PTR3YFR029W PFA5Q03289 374 aa3.74□□□□□ -1.81
PTR3YFR029W RIF2Q06208 395 aa3.74□□□□□ -1.81
PTR3YFR029W TPT1Q12272 230 aaKnown RBP3.74□□□□□ -1.81
PTR3YFR029W ATG34Q12292 412 aa3.74□□□□□ -1.81
PTR3YFR029W MAK32P23060 363 aa3.73□□□□□ -1.81
PTR3YFR029W ERG4P25340 473 aa3.73□□□□□ -1.81
PTR3YFR029W ITR2P30606 609 aa3.73□□□□□ -1.81
PTR3YFR029W MKK1P32490 508 aa3.73□□□□□ -1.81
PTR3YFR029W NUP2P32499 720 aa3.73□□□□□ -1.81
PTR3YFR029W RAD5P32849 1169 aaPredicted RBP3.73□□□□□ -1.81
PTR3YFR029W NTF2P33331 125 aaKnown RBP3.73□□□□□ -1.81
PTR3YFR029W YMC2P38087 329 aa3.73□□□□□ -1.81
PTR3YFR029W YBR096WP38256 230 aa3.73□□□□□ -1.81
PTR3YFR029W FZO1P38297 855 aa3.73□□□□□ -1.81
PTR3YFR029W GOS1P38736 223 aa3.73□□□□□ -1.81
PTR3YFR029W COG3P40094 801 aa3.73□□□□□ -1.81
PTR3YFR029W YIL060WP40519 144 aa3.73□□□□□ -1.81
PTR3YFR029W SNX4P47057 423 aa3.73□□□□□ -1.81
PTR3YFR029W YJR141WP47172 347 aaPredicted RBP3.73□□□□□ -1.81
PTR3YFR029W LST7P53237 242 aa3.73□□□□□ -1.81
PTR3YFR029W MTM1P53320 366 aa3.73□□□□□ -1.81
PTR3YFR029W DUG3P53871 357 aa3.73□□□□□ -1.81
PTR3YFR029W SMX3P54999 86 aaPredicted RBP3.73□□□□□ -1.81
PTR3YFR029W YML096WQ04489 525 aa3.73□□□□□ -1.81
PTR3YFR029W CSM3Q04659 317 aa3.73□□□□□ -1.81
PTR3YFR029W TMA10Q06177 86 aa3.73□□□□□ -1.81
PTR3YFR029W GAT3Q07928 141 aa3.73□□□□□ -1.81
PTR3YFR029W YPL199CQ08954 240 aa3.73□□□□□ -1.81
PTR3YFR029W ISY1P21374 235 aaPredicted RBP3.73□□□□□ -1.81
PTR3YFR029W ECM13P38195 257 aa3.73□□□□□ -1.81
PTR3YFR029W AIM3P38266 947 aaKnown RBP3.73□□□□□ -1.81
PTR3YFR029W YBP1P38315 674 aa3.73□□□□□ -1.81
PTR3YFR029W CYC2P38909 366 aa3.73□□□□□ -1.81
PTR3YFR029W FAA2P39518 744 aa3.73□□□□□ -1.81
PTR3YFR029W YAT2P40017 923 aa3.73□□□□□ -1.81
PTR3YFR029W YNL040WP53960 456 aaPredicted RBP3.73□□□□□ -1.81
PTR3YFR029W YVH1Q02256 364 aaKnown RBP3.73□□□□□ -1.81
PTR3YFR029W CCE1Q03702 353 aa3.73□□□□□ -1.81
PTR3YFR029W ECI1Q05871 280 aa3.73□□□□□ -1.81
PTR3YFR029W YOL019WQ08157 551 aa3.73□□□□□ -1.81
PTR3YFR029W ARF1P11076 181 aaKnown RBP3.72□□□□□ -1.81
PTR3YFR029W GCY1P14065 312 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PTR3YFR029W PUB1P32588 453 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PTR3YFR029W ECM8P38246 354 aa3.72□□□□□ -1.81
PTR3YFR029W TRM5P38793 499 aa3.72□□□□□ -1.81
PTR3YFR029W ERV46P39727 415 aa3.72□□□□□ -1.81
PTR3YFR029W QRI1P43123 477 aaKnown RBP3.72□□□□□ -1.81
PTR3YFR029W TAD2P47058 250 aa3.72□□□□□ -1.81
PTR3YFR029W YGL204CP53089 101 aa3.72□□□□□ -1.81
PTR3YFR029W CDH1P53197 566 aa3.72□□□□□ -1.81
PTR3YFR029W YNL095CP53932 642 aa3.72□□□□□ -1.81
PTR3YFR029W ERG13P54839 491 aaKnown RBP3.72□□□□□ -1.81
PTR3YFR029W HER2Q03557 464 aa3.72□□□□□ -1.81
PTR3YFR029W YPL150WQ12152 901 aa3.72□□□□□ -1.81
PTR3YFR029W YLL056CQ12177 298 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms