RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C NOP56Q12460 504 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
YPT1YFL038C HTZ1Q12692 134 aaKnown RBP6□□□□□ -1.45
YPT1YFL038C MTR10Q99189 972 aa6□□□□□ -1.45
YPT1YFL038C RAD52P06778 471 aaKnown RBP5.99□□□□□ -1.45
YPT1YFL038C COX9P07255 59 aa5.99□□□□□ -1.45
YPT1YFL038C PEP4P07267 405 aaKnown RBP5.99□□□□□ -1.45
YPT1YFL038C RPS18AP0CX55 146 aaKnown RBP5.99□□□□□ -1.45
YPT1YFL038C RPS18BP0CX56 146 aaPredicted RBP5.99□□□□□ -1.45
YPT1YFL038C ERD2P18414 219 aa5.99□□□□□ -1.45
YPT1YFL038C PRP2P20095 876 aaPredicted RBP5.99□□□□□ -1.45
YPT1YFL038C IMG2P25642 146 aaPredicted RBP5.99□□□□□ -1.45
YPT1YFL038C CDC12P32468 407 aaKnown RBP5.99□□□□□ -1.45
YPT1YFL038C SRB5P32585 307 aa5.99□□□□□ -1.45
YPT1YFL038C RML2P32611 393 aa5.99□□□□□ -1.45
YPT1YFL038C YEF1P32622 495 aa5.99□□□□□ -1.45
YPT1YFL038C CDC13P32797 924 aaKnown RBP5.99□□□□□ -1.45
YPT1YFL038C VPS17P32913 551 aa5.99□□□□□ -1.45
YPT1YFL038C PET112P33893 541 aa5.99□□□□□ -1.45
YPT1YFL038C SDS22P36047 338 aa5.99□□□□□ -1.45
YPT1YFL038C MRPL3P36516 390 aa5.99□□□□□ -1.45
YPT1YFL038C EHT1P38295 451 aa5.99□□□□□ -1.45
YPT1YFL038C ECM34P38728 170 aa5.99□□□□□ -1.45
YPT1YFL038C TRR2P38816 342 aa5.99□□□□□ -1.45
YPT1YFL038C PTH1P38876 190 aaKnown RBP5.99□□□□□ -1.45
YPT1YFL038C MNL1P38888 796 aa5.99□□□□□ -1.45
YPT1YFL038C LYS1P38998 373 aaRIP-Chip data5.99□□□□□ -1.45not detected
YPT1YFL038C GIP2P40036 548 aa5.99□□□□□ -1.45
YPT1YFL038C SER3P40054 469 aa5.99□□□□□ -1.45
YPT1YFL038C YNL195CP40168 261 aa5.99□□□□□ -1.45
YPT1YFL038C YIL166CP40445 542 aa5.99□□□□□ -1.45
YPT1YFL038C HIS6P40545 261 aa5.99□□□□□ -1.45
YPT1YFL038C POP1P41812 875 aa5.99□□□□□ -1.45
YPT1YFL038C BNA6P43619 295 aa5.99□□□□□ -1.45
YPT1YFL038C TIM54P47045 478 aa5.99□□□□□ -1.45
YPT1YFL038C FAA4P47912 694 aaKnown RBP5.99□□□□□ -1.45
YPT1YFL038C YMR130WQ04223 302 aa5.99□□□□□ -1.45
YPT1YFL038C HLR1Q04429 423 aa5.99□□□□□ -1.45
YPT1YFL038C SMA2Q04658 369 aa5.99□□□□□ -1.45
YPT1YFL038C RRN11Q04712 507 aa5.99□□□□□ -1.45
YPT1YFL038C ARV1Q06541 321 aa5.99□□□□□ -1.45
YPT1YFL038C YPR172WQ06608 200 aa5.99□□□□□ -1.45
YPT1YFL038C YPR091CQ06833 770 aa5.99□□□□□ -1.45
YPT1YFL038C SSK1Q07084 712 aa5.99□□□□□ -1.45
YPT1YFL038C RAX1Q08760 435 aa5.99□□□□□ -1.45
YPT1YFL038C GCN4P03069 281 aa5.98□□□□□ -1.45
YPT1YFL038C MRP1P10662 321 aaKnown RBP5.98□□□□□ -1.45
YPT1YFL038C NHP6BP11633 99 aaKnown RBP5.98□□□□□ -1.45
YPT1YFL038C RED1P14291 827 aa5.98□□□□□ -1.45
YPT1YFL038C SEN2P16658 377 aa5.98□□□□□ -1.45
YPT1YFL038C PTP1P25044 335 aa5.98□□□□□ -1.45
YPT1YFL038C FUN19P28003 413 aaPredicted RBP5.98□□□□□ -1.45
YPT1YFL038C PRO1P32264 428 aa5.98□□□□□ -1.45
YPT1YFL038C SKN1P33336 771 aa5.98□□□□□ -1.45
YPT1YFL038C NIC96P34077 839 aa5.98□□□□□ -1.45
YPT1YFL038C AUR1P36107 401 aaPredicted RBP5.98□□□□□ -1.45
YPT1YFL038C GLY1P37303 387 aaKnown RBP5.98□□□□□ -1.45
YPT1YFL038C HRB1P38922 454 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
YPT1YFL038C FAA3P39002 694 aa5.98□□□□□ -1.45
YPT1YFL038C VMA7P39111 118 aa5.98□□□□□ -1.45
YPT1YFL038C YIL108WP40483 696 aaKnown RBP5.98□□□□□ -1.45
YPT1YFL038C SMK1P41808 388 aa5.98□□□□□ -1.45
YPT1YFL038C PMT6P42934 759 aa5.98□□□□□ -1.45
YPT1YFL038C PPT1P53043 513 aa5.98□□□□□ -1.45
YPT1YFL038C YPR127WQ06494 345 aa5.98□□□□□ -1.45
YPT1YFL038C BRX1Q08235 291 aaKnown RBP5.98□□□□□ -1.45
YPT1YFL038C TIR4Q12218 487 aaPredicted RBP5.98□□□□□ -1.45
YPT1YFL038C YBR298C-AQ8TGK4 73 aa5.98□□□□□ -1.45
YPT1YFL038C CDC9P04819 755 aa5.97□□□□□ -1.45
YPT1YFL038C HAP4P14064 554 aa5.97□□□□□ -1.45
YPT1YFL038C YCL002CP25565 263 aa5.97□□□□□ -1.45
YPT1YFL038C PAU2P32612 120 aa5.97□□□□□ -1.45
YPT1YFL038C PTR2P32901 601 aa5.97□□□□□ -1.45
YPT1YFL038C HTD2P38790 280 aaKnown RBP5.97□□□□□ -1.45
YPT1YFL038C ANS1P38832 159 aa5.97□□□□□ -1.45
YPT1YFL038C SDP1P40479 209 aa5.97□□□□□ -1.45
YPT1YFL038C PKP1P40530 394 aa5.97□□□□□ -1.45
YPT1YFL038C PAM16P42949 149 aa5.97□□□□□ -1.45
YPT1YFL038C DPB11P47027 764 aaPredicted RBP5.97□□□□□ -1.45
YPT1YFL038C TIM11P81449 96 aaPredicted RBP5.97□□□□□ -1.45
YPT1YFL038C EGD1Q02642 157 aaKnown RBP5.97□□□□□ -1.45
YPT1YFL038C YML108WQ03759 105 aa5.97□□□□□ -1.45
YPT1YFL038C YMR252CQ04814 134 aa5.97□□□□□ -1.45
YPT1YFL038C YOR365CQ08844 703 aa5.97□□□□□ -1.45
YPT1YFL038C FMP16Q12497 93 aa5.97□□□□□ -1.45
YPT1YFL038C DFG16Q99234 619 aa5.97□□□□□ -1.45
YPT1YFL038C AI1P03875 834 aa5.96□□□□□ -1.46
YPT1YFL038C RNQ1P25367 405 aa5.96□□□□□ -1.46
YPT1YFL038C PUT3P25502 979 aaPredicted RBP5.96□□□□□ -1.46
YPT1YFL038C PBN1P25580 416 aa5.96□□□□□ -1.46
YPT1YFL038C ITR1P30605 584 aa5.96□□□□□ -1.46
YPT1YFL038C PRE4P30657 266 aa5.96□□□□□ -1.46
YPT1YFL038C ATS1P31386 333 aa5.96□□□□□ -1.46
YPT1YFL038C TIM12P32830 109 aa5.96□□□□□ -1.46
YPT1YFL038C LST4P34239 828 aa5.96□□□□□ -1.46
YPT1YFL038C MTH1P35198 433 aa5.96□□□□□ -1.46
YPT1YFL038C MAL32P38158 584 aa5.96□□□□□ -1.46
YPT1YFL038C RRF1P38771 230 aa5.96□□□□□ -1.46
YPT1YFL038C RRP4P38792 359 aaKnown RBP5.96□□□□□ -1.46
YPT1YFL038C PFS1P38872 237 aa5.96□□□□□ -1.46
YPT1YFL038C FET3P38993 636 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms