RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W YFL067WP43537 175 aa4.42□□□□□ -1.7
UBC6YER100W OTU1P43558 301 aa4.42□□□□□ -1.7
UBC6YER100W SAD1P43589 448 aa4.42□□□□□ -1.7
UBC6YER100W YJL118WP47022 219 aa4.42□□□□□ -1.7
UBC6YER100W HCH1P53834 153 aa4.42□□□□□ -1.7
UBC6YER100W TRM82Q03774 444 aa4.42□□□□□ -1.7
UBC6YER100W YPR091CQ06833 770 aa4.42□□□□□ -1.7
UBC6YER100W BSC6Q08280 497 aa4.42□□□□□ -1.7
UBC6YER100W RDL2Q08742 149 aaKnown RBP4.42□□□□□ -1.7
UBC6YER100W DDC1Q08949 612 aa4.42□□□□□ -1.7
UBC6YER100W FCY22Q12119 530 aa4.42□□□□□ -1.7
UBC6YER100W RPN6Q12377 434 aa4.42□□□□□ -1.7
UBC6YER100W ERP3Q12403 225 aa4.42□□□□□ -1.7
UBC6YER100W SAL1D6W196 494 aa4.41□□□□□ -1.7
UBC6YER100W REP1P03871 373 aa4.41□□□□□ -1.7
UBC6YER100W RPL31AP0C2H8 113 aaKnown RBP4.41□□□□□ -1.7
UBC6YER100W NUP2P32499 720 aa4.41□□□□□ -1.7
UBC6YER100W RPC37P36121 282 aa4.41□□□□□ -1.7
UBC6YER100W RCK2P38623 610 aa4.41□□□□□ -1.7
UBC6YER100W LSM12P38828 187 aaKnown RBP4.41□□□□□ -1.7
UBC6YER100W TDA11P38854 504 aa4.41□□□□□ -1.7
UBC6YER100W NCA3P46955 337 aa4.41□□□□□ -1.7
UBC6YER100W CLD1P53264 445 aa4.41□□□□□ -1.7
UBC6YER100W WSC2P53832 503 aa4.41□□□□□ -1.7
UBC6YER100W PGA2P53903 129 aa4.41□□□□□ -1.7
UBC6YER100W YMR209CQ03648 457 aa4.41□□□□□ -1.7
UBC6YER100W YMR010WQ03687 405 aa4.41□□□□□ -1.7
UBC6YER100W ADH6Q04894 360 aaKnown RBP4.41□□□□□ -1.7
UBC6YER100W SDO1Q07953 250 aaKnown RBP4.41□□□□□ -1.7
UBC6YER100W PRM4Q12498 284 aa4.41□□□□□ -1.7
UBC6YER100W RPL23AP0CX41 137 aaKnown RBP4.4□□□□□ -1.71
UBC6YER100W RPL23BP0CX42 137 aaKnown RBP4.4□□□□□ -1.71
UBC6YER100W RPS18AP0CX55 146 aaKnown RBP4.4□□□□□ -1.71
UBC6YER100W RPS18BP0CX56 146 aaPredicted RBP4.4□□□□□ -1.71
UBC6YER100W MET16P18408 261 aaPredicted RBP4.4□□□□□ -1.71
UBC6YER100W CDC42P19073 191 aa4.4□□□□□ -1.71
UBC6YER100W DAL82P21705 255 aa4.4□□□□□ -1.71
UBC6YER100W CPR4P25334 318 aa4.4□□□□□ -1.71
UBC6YER100W YCR016WP25617 290 aaKnown RBP4.4□□□□□ -1.71
UBC6YER100W CYM1P32898 989 aa4.4□□□□□ -1.71
UBC6YER100W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
UBC6YER100W YKL063CP35725 167 aa4.4□□□□□ -1.71
UBC6YER100W HAC1P41546 238 aa4.4□□□□□ -1.71
UBC6YER100W SCS3P53012 380 aa4.4□□□□□ -1.71
UBC6YER100W MST27P53176 234 aa4.4□□□□□ -1.71
UBC6YER100W SWC4P53201 476 aa4.4□□□□□ -1.71
UBC6YER100W ALG11P53954 548 aaKnown RBP4.4□□□□□ -1.71
UBC6YER100W SNX41Q04053 625 aa4.4□□□□□ -1.71
UBC6YER100W RTN1Q04947 295 aaKnown RBP4.4□□□□□ -1.71
UBC6YER100W GRS2Q06817 618 aa4.4□□□□□ -1.71
UBC6YER100W CMS1Q07897 291 aaKnown RBP4.4□□□□□ -1.71
UBC6YER100W FRE8Q12209 686 aa4.4□□□□□ -1.71
UBC6YER100W YDL199CQ12407 687 aa4.4□□□□□ -1.71
UBC6YER100W TAD3Q9URQ3 322 aa4.4□□□□□ -1.71
UBC6YER100W SAC3P46674 1301 aa4.4□□□□□ -1.71
UBC6YER100W MSI1P13712 422 aa4.39□□□□□ -1.71
UBC6YER100W CTA1P15202 515 aa4.39□□□□□ -1.71
UBC6YER100W VPS1P21576 704 aaKnown RBP4.39□□□□□ -1.71
UBC6YER100W PRO3P32263 286 aaKnown RBP4.39□□□□□ -1.71
UBC6YER100W MCH2P36032 473 aa4.39□□□□□ -1.71
UBC6YER100W ECM8P38246 354 aa4.39□□□□□ -1.71
UBC6YER100W COA1P40452 197 aa4.39□□□□□ -1.71
UBC6YER100W TIS11P47977 285 aa4.39□□□□□ -1.71
UBC6YER100W CGR1P53188 120 aa4.39□□□□□ -1.71
UBC6YER100W CWC25P53854 179 aaKnown RBP4.39□□□□□ -1.71
UBC6YER100W KTR6P54070 446 aa4.39□□□□□ -1.71
UBC6YER100W REX2P54964 269 aaKnown RBP4.39□□□□□ -1.71
UBC6YER100W ASR1Q06834 288 aa4.39□□□□□ -1.71
UBC6YER100W PAM18Q07914 168 aa4.39□□□□□ -1.71
UBC6YER100W YCL021W-AQ96VH3 125 aa4.39□□□□□ -1.71
UBC6YER100W CHD1P32657 1468 aa4.38□□□□□ -1.71
UBC6YER100W KRE6P32486 720 aa4.38□□□□□ -1.71
UBC6YER100W PDC2P32896 925 aa4.38□□□□□ -1.71
UBC6YER100W AIM29P36154 155 aa4.38□□□□□ -1.71
UBC6YER100W GDS1P41913 522 aa4.38□□□□□ -1.71
UBC6YER100W YGR210CP42942 411 aa4.38□□□□□ -1.71
UBC6YER100W WWM1P43582 211 aaKnown RBP4.38□□□□□ -1.71
UBC6YER100W UBC13P52490 153 aa4.38□□□□□ -1.71
UBC6YER100W MRPL50P53724 139 aa4.38□□□□□ -1.71
UBC6YER100W SUR7P54003 302 aa4.38□□□□□ -1.71
UBC6YER100W KRE28Q04431 385 aa4.38□□□□□ -1.71
UBC6YER100W DTD1Q07648 150 aaKnown RBP4.38□□□□□ -1.71
UBC6YER100W PPT2Q12036 173 aa4.38□□□□□ -1.71
UBC6YER100W UTP23Q12339 254 aaKnown RBP4.38□□□□□ -1.71
UBC6YER100W HMS1Q12398 434 aa4.38□□□□□ -1.71
UBC6YER100W YOS9Q99220 542 aa4.38□□□□□ -1.71
UBC6YER100W TDH2P00358 332 aaKnown RBP4.37□□□□□ -1.71
UBC6YER100W ILV1P00927 576 aaKnown RBP4.37□□□□□ -1.71
UBC6YER100W MIR1P23641 311 aaKnown RBP4.37□□□□□ -1.71
UBC6YER100W PRR1P28708 518 aa4.37□□□□□ -1.71
UBC6YER100W SRB4P32569 687 aa4.37□□□□□ -1.71
UBC6YER100W CBF5P33322 483 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
UBC6YER100W YKL071WP36086 256 aa4.37□□□□□ -1.71
UBC6YER100W ANR2P36090 516 aaPredicted RBP4.37□□□□□ -1.71
UBC6YER100W BIG1P38813 335 aa4.37□□□□□ -1.71
UBC6YER100W SOP4P39543 234 aaPredicted RBP4.37□□□□□ -1.71
UBC6YER100W DDI1P40087 428 aa4.37□□□□□ -1.71
UBC6YER100W CRZ1P53968 678 aa4.37□□□□□ -1.71
UBC6YER100W INP2Q03824 705 aa4.37□□□□□ -1.71
UBC6YER100W VBA1Q04301 562 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms