RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C DDI1P40087 428 aa7.11□□□□□ -1.27
PUP3YER094C STB1P42845 420 aa7.11□□□□□ -1.27
PUP3YER094C YFR054CP43622 192 aa7.11□□□□□ -1.27
PUP3YER094C IRC7P43623 340 aa7.11□□□□□ -1.27
PUP3YER094C YJR098CP47139 656 aa7.11□□□□□ -1.27
PUP3YER094C OCA1P50946 238 aaPredicted RBP7.11□□□□□ -1.27
PUP3YER094C YGL235WP53071 178 aa7.11□□□□□ -1.27
PUP3YER094C VPS73P53142 486 aaKnown RBP7.11□□□□□ -1.27
PUP3YER094C MNT4P53745 580 aa7.11□□□□□ -1.27
PUP3YER094C PGA1P53896 198 aa7.11□□□□□ -1.27
PUP3YER094C SRL4Q03085 281 aa7.11□□□□□ -1.27
PUP3YER094C NUP53Q03790 475 aa7.11□□□□□ -1.27
PUP3YER094C SPC19Q03954 165 aa7.11□□□□□ -1.27
PUP3YER094C FMP42Q04991 504 aa7.11□□□□□ -1.27
PUP3YER094C DCR2Q05924 578 aa7.11□□□□□ -1.27
PUP3YER094C YLR346CQ06139 101 aa7.11□□□□□ -1.27
PUP3YER094C YOR389WQ08912 624 aa7.11□□□□□ -1.27
PUP3YER094C RKM1Q08961 583 aaPredicted RBP7.11□□□□□ -1.27
PUP3YER094C YDL177CQ12257 170 aa7.11□□□□□ -1.27
PUP3YER094C FRE7Q12333 620 aa7.11□□□□□ -1.27
PUP3YER094C IES3Q12345 250 aa7.11□□□□□ -1.27
PUP3YER094C IRA1P18963 3092 aa7.1□□□□□ -1.27
PUP3YER094C HAP4P14064 554 aa7.1□□□□□ -1.27
PUP3YER094C PHO80P20052 293 aa7.1□□□□□ -1.27
PUP3YER094C CLB2P24869 491 aa7.1□□□□□ -1.27
PUP3YER094C PRE2P30656 287 aaKnown RBP7.1□□□□□ -1.27
PUP3YER094C SUR1P33300 382 aa7.1□□□□□ -1.27
PUP3YER094C HIS7P33734 552 aaKnown RBP7.1□□□□□ -1.27
PUP3YER094C GPX1P36014 167 aa7.1□□□□□ -1.27
PUP3YER094C YNL208WP40159 199 aaKnown RBP7.1□□□□□ -1.27
PUP3YER094C ECL1P48235 211 aa7.1□□□□□ -1.27
PUP3YER094C RRP17Q04031 235 aaPredicted RBP7.1□□□□□ -1.27
PUP3YER094C DFG5Q05031 458 aa7.1□□□□□ -1.27
PUP3YER094C MCP1Q12106 302 aa7.1□□□□□ -1.27
PUP3YER094C RPL24BP24000 155 aaKnown RBP7.09□□□□□ -1.27
PUP3YER094C NAM9P27929 486 aa7.09□□□□□ -1.27
PUP3YER094C ARO7P32178 256 aa7.09□□□□□ -1.27
PUP3YER094C YEF1P32622 495 aa7.09□□□□□ -1.27
PUP3YER094C NIC96P34077 839 aa7.09□□□□□ -1.27
PUP3YER094C UTP11P34247 250 aaPredicted RBP7.09□□□□□ -1.27
PUP3YER094C GRE3P38715 327 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
PUP3YER094C NVJ1P38881 321 aa7.09□□□□□ -1.27
PUP3YER094C YER158CP40095 573 aa7.09□□□□□ -1.27
PUP3YER094C OGG1P53397 376 aaPredicted RBP7.09□□□□□ -1.27
PUP3YER094C RSM10Q03201 203 aa7.09□□□□□ -1.27
PUP3YER094C CGI121Q03705 181 aaKnown RBP7.09□□□□□ -1.27
PUP3YER094C BUR2Q05949 395 aa7.09□□□□□ -1.27
PUP3YER094C YLR173WQ06247 608 aa7.09□□□□□ -1.27
PUP3YER094C HDA2Q06629 674 aa7.09□□□□□ -1.27
PUP3YER094C COQ10Q08058 207 aa7.09□□□□□ -1.27
PUP3YER094C RDR1Q08904 546 aa7.09□□□□□ -1.27
PUP3YER094C RLM1Q12224 676 aa7.09□□□□□ -1.27
PUP3YER094C KIN28P06242 306 aa7.08□□□□□ -1.28
PUP3YER094C YGL041W-AP0C5N3 154 aa7.08□□□□□ -1.28
PUP3YER094C SEC12P11655 471 aa7.08□□□□□ -1.28
PUP3YER094C LDB16P25587 256 aa7.08□□□□□ -1.28
PUP3YER094C MDH3P32419 343 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
PUP3YER094C TRS65P32893 560 aa7.08□□□□□ -1.28
PUP3YER094C MRPL16P38064 232 aa7.08□□□□□ -1.28
PUP3YER094C SHE1P38200 338 aa7.08□□□□□ -1.28
PUP3YER094C RPP1P38786 293 aa7.08□□□□□ -1.28
PUP3YER094C FMC1P40491 155 aa7.08□□□□□ -1.28
PUP3YER094C RRN9P53437 365 aa7.08□□□□□ -1.28
PUP3YER094C ATG21Q02887 496 aa7.08□□□□□ -1.28
PUP3YER094C YDR249CQ03787 373 aa7.08□□□□□ -1.28
PUP3YER094C PLM2Q04383 521 aa7.08□□□□□ -1.28
PUP3YER094C GAL83Q04739 417 aa7.08□□□□□ -1.28
PUP3YER094C YMR315WQ04869 349 aaKnown RBP7.08□□□□□ -1.28
PUP3YER094C COX20Q04935 205 aa7.08□□□□□ -1.28
PUP3YER094C YPS7Q06325 596 aa7.08□□□□□ -1.28
PUP3YER094C YOR238WQ08634 303 aa7.08□□□□□ -1.28
PUP3YER094C YOR289WQ12012 251 aaPredicted RBP7.08□□□□□ -1.28
PUP3YER094C BTS1Q12051 335 aa7.08□□□□□ -1.28
PUP3YER094C FPS1P23900 669 aa7.07□□□□□ -1.28
PUP3YER094C CPR3P25719 182 aa7.07□□□□□ -1.28
PUP3YER094C SBA1P28707 216 aaKnown RBP7.07□□□□□ -1.28
PUP3YER094C TPO5P36029 618 aa7.07□□□□□ -1.28
PUP3YER094C CHK1P38147 527 aa7.07□□□□□ -1.28
PUP3YER094C FMP23P38231 175 aa7.07□□□□□ -1.28
PUP3YER094C OM14P38325 134 aa7.07□□□□□ -1.28
PUP3YER094C PHO90P39535 881 aa7.07□□□□□ -1.28
PUP3YER094C JLP2P40206 208 aa7.07□□□□□ -1.28
PUP3YER094C PKP1P40530 394 aa7.07□□□□□ -1.28
PUP3YER094C NAS2P40555 220 aa7.07□□□□□ -1.28
PUP3YER094C VNX1P42839 908 aa7.07□□□□□ -1.28
PUP3YER094C PFS2P42841 465 aaKnown RBP7.07□□□□□ -1.28
PUP3YER094C VOA1P53262 265 aa7.07□□□□□ -1.28
PUP3YER094C MPP6P53725 186 aaPredicted RBP7.07□□□□□ -1.28
PUP3YER094C PDR16P53860 351 aaKnown RBP7.07□□□□□ -1.28
PUP3YER094C FDC1Q03034 503 aa7.07□□□□□ -1.28
PUP3YER094C PFA5Q03289 374 aa7.07□□□□□ -1.28
PUP3YER094C GRX3Q03835 250 aa7.07□□□□□ -1.28
PUP3YER094C SNX41Q04053 625 aa7.07□□□□□ -1.28
PUP3YER094C IRC19Q07843 230 aa7.07□□□□□ -1.28
PUP3YER094C HRT1Q08273 121 aa7.07□□□□□ -1.28
PUP3YER094C RRG7Q08774 242 aaPredicted RBP7.07□□□□□ -1.28
PUP3YER094C HSP42Q12329 375 aa7.07□□□□□ -1.28
PUP3YER094C YHR214C-DP0CX93 97 aa7.06□□□□□ -1.28
PUP3YER094C RPB8P20436 146 aa7.06□□□□□ -1.28
PUP3YER094C AIM17P23180 465 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms