RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeastyeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC8YEL013W ROX1P25042 368 aa2.6□□□□□ -1.99
VAC8YEL013W TIF3P34167 436 aaKnown RBP2.6□□□□□ -1.99
VAC8YEL013W BLI1P35727 113 aa2.6□□□□□ -1.99
VAC8YEL013W KRE9P39005 276 aa2.6□□□□□ -1.99
VAC8YEL013W YIL067CP40514 678 aa2.6□□□□□ -1.99
VAC8YEL013W APQ12P40532 138 aa2.6□□□□□ -1.99
VAC8YEL013W YGR067CP53243 804 aa2.6□□□□□ -1.99
VAC8YEL013W GIS2P53849 153 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
VAC8YEL013W JJJ1P53863 590 aa2.6□□□□□ -1.99
VAC8YEL013W RPM2Q02773 1202 aa2.6□□□□□ -1.99
VAC8YEL013W SOV1Q04748 898 aa2.6□□□□□ -1.99
VAC8YEL013W YDR278CQ05612 105 aa2.6□□□□□ -1.99
VAC8YEL013W VPS38Q05919 439 aa2.6□□□□□ -1.99
VAC8YEL013W LDB17Q12342 491 aa2.6□□□□□ -1.99
VAC8YEL013W RTN2Q12443 393 aa2.6□□□□□ -1.99
VAC8YEL013W LEU4P06208 619 aaKnown RBP2.59□□□□□ -1.99
VAC8YEL013W STE3P06783 470 aa2.59□□□□□ -1.99
VAC8YEL013W DFR1P07807 211 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
VAC8YEL013W RPB9P27999 122 aa2.59□□□□□ -1.99
VAC8YEL013W ERG3P32353 365 aa2.59□□□□□ -1.99
VAC8YEL013W MRPS5P33759 307 aa2.59□□□□□ -1.99
VAC8YEL013W ASC1P38011 319 aaKnown RBP2.59□□□□□ -1.99
VAC8YEL013W HIS2P38635 335 aa2.59□□□□□ -1.99
VAC8YEL013W GRE3P38715 327 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
VAC8YEL013W PTH1P38876 190 aaKnown RBP2.59□□□□□ -1.99
VAC8YEL013W UTP9P38882 575 aaKnown RBP2.59□□□□□ -1.99
VAC8YEL013W MET28P40573 187 aa2.59□□□□□ -1.99
VAC8YEL013W RPL10P41805 221 aaKnown RBP2.59□□□□□ -1.99
VAC8YEL013W HRI1Q05905 244 aaKnown RBP2.59□□□□□ -1.99
VAC8YEL013W SYO1Q07395 620 aa2.59□□□□□ -1.99
VAC8YEL013W TMC1Q08422 150 aaPredicted RBP2.59□□□□□ -1.99
VAC8YEL013W RLM1Q12224 676 aa2.59□□□□□ -1.99
VAC8YEL013W MTR10Q99189 972 aa2.59□□□□□ -1.99
VAC8YEL013W YOS9Q99220 542 aa2.59□□□□□ -1.99
VAC8YEL013W DET1Q99288 334 aaKnown RBP2.59□□□□□ -1.99
VAC8YEL013W RAD52P06778 471 aaKnown RBP2.59□□□□□ -2
VAC8YEL013W YFR010W-AP0C5N0 62 aa2.59□□□□□ -2
VAC8YEL013W RSR1P13856 272 aa2.59□□□□□ -2
VAC8YEL013W DBF2P22204 572 aa2.59□□□□□ -2
VAC8YEL013W SPB1P25582 841 aaPredicted RBP2.59□□□□□ -2
VAC8YEL013W MTC4P38335 694 aaKnown RBP2.59□□□□□ -2
VAC8YEL013W PRS3P38689 320 aaKnown RBP2.59□□□□□ -2
VAC8YEL013W MET18P40469 1032 aa2.59□□□□□ -2
VAC8YEL013W GDS1P41913 522 aa2.59□□□□□ -2
VAC8YEL013W PGU1P47180 361 aa2.59□□□□□ -2
VAC8YEL013W YJR154WP47181 346 aa2.59□□□□□ -2
VAC8YEL013W YDR239CQ03780 787 aa2.59□□□□□ -2
VAC8YEL013W YMR155WQ03795 547 aa2.59□□□□□ -2
VAC8YEL013W ADH6Q04894 360 aaKnown RBP2.59□□□□□ -2
VAC8YEL013W BOP2Q06150 570 aa2.59□□□□□ -2
VAC8YEL013W RRP42Q12277 265 aaPredicted RBP2.59□□□□□ -2
VAC8YEL013W CDC21P06785 304 aa2.58□□□□□ -2
VAC8YEL013W MET2P08465 486 aa2.58□□□□□ -2
VAC8YEL013W SSC1P0CS90 654 aaKnown RBP2.58□□□□□ -2
VAC8YEL013W DAP2P18962 818 aa2.58□□□□□ -2
VAC8YEL013W MCK1P21965 375 aaKnown RBP2.58□□□□□ -2
VAC8YEL013W SPS22P25380 463 aa2.58□□□□□ -2
VAC8YEL013W BYE1P36106 594 aa2.58□□□□□ -2
VAC8YEL013W RRT2P38332 387 aa2.58□□□□□ -2
VAC8YEL013W SMF2P38778 549 aa2.58□□□□□ -2
VAC8YEL013W SMC2P38989 1170 aaKnown RBP2.58□□□□□ -2
VAC8YEL013W NPT1P39683 429 aaKnown RBP2.58□□□□□ -2
VAC8YEL013W RPR2P40571 144 aa2.58□□□□□ -2
VAC8YEL013W YJL213WP40896 331 aa2.58□□□□□ -2
VAC8YEL013W BRO1P48582 844 aa2.58□□□□□ -2
VAC8YEL013W ERP1Q05359 219 aaKnown RBP2.58□□□□□ -2
VAC8YEL013W MRPL51Q06090 140 aaPredicted RBP2.58□□□□□ -2
VAC8YEL013W THP1Q08231 455 aa2.58□□□□□ -2
VAC8YEL013W RRP40Q08285 240 aaKnown RBP2.58□□□□□ -2
VAC8YEL013W YDL009CQ12210 107 aa2.58□□□□□ -2
VAC8YEL013W AYT1Q12226 474 aa2.58□□□□□ -2
VAC8YEL013W SFG1Q12507 346 aa2.58□□□□□ -2
VAC8YEL013W STE2D6VTK4 431 aa2.57□□□□□ -2
VAC8YEL013W HEM4P06174 275 aa2.57□□□□□ -2
VAC8YEL013W YSF3P0C074 85 aaPredicted RBP2.57□□□□□ -2
VAC8YEL013W NSP1P14907 823 aaKnown RBP2.57□□□□□ -2
VAC8YEL013W LOS1P33418 1100 aaPredicted RBP2.57□□□□□ -2
VAC8YEL013W HAT2P39984 401 aa2.57□□□□□ -2
VAC8YEL013W AVT7P40501 490 aa2.57□□□□□ -2
VAC8YEL013W TOM22P49334 152 aa2.57□□□□□ -2
VAC8YEL013W YML6P51998 286 aa2.57□□□□□ -2
VAC8YEL013W IBD2P53892 351 aa2.57□□□□□ -2
VAC8YEL013W IRC15Q02733 499 aa2.57□□□□□ -2
VAC8YEL013W BCH1Q05029 724 aa2.57□□□□□ -2
VAC8YEL013W YLR446WQ06204 433 aa2.57□□□□□ -2
VAC8YEL013W ESA1Q08649 445 aa2.57□□□□□ -2
VAC8YEL013W YOR365CQ08844 703 aa2.57□□□□□ -2
VAC8YEL013W YOL159C-AQ3E769 90 aa2.57□□□□□ -2
VAC8YEL013W CBP6P07253 162 aaPredicted RBP2.56□□□□□ -2
VAC8YEL013W PEP4P07267 405 aaKnown RBP2.56□□□□□ -2
VAC8YEL013W IMA3P0CW40 589 aa2.56□□□□□ -2
VAC8YEL013W IMA4P0CW41 589 aa2.56□□□□□ -2
VAC8YEL013W RPL20AP0CX23 172 aaKnown RBP2.56□□□□□ -2
VAC8YEL013W RPL20BP0CX24 172 aaPredicted RBP2.56□□□□□ -2
VAC8YEL013W ERD1P16151 362 aa2.56□□□□□ -2
VAC8YEL013W IDH2P28241 369 aaKnown RBP2.56□□□□□ -2
VAC8YEL013W PAP1P29468 568 aaKnown RBP2.56□□□□□ -2
VAC8YEL013W AGA1P32323 725 aa2.56□□□□□ -2
VAC8YEL013W NPL6P32832 435 aa2.56□□□□□ -2
VAC8YEL013W BNA4P38169 460 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms