RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C GPX1P36014 167 aa9.72□□□□□ -0.85
VPS60YDR486C YKL071WP36086 256 aa9.72□□□□□ -0.85
VPS60YDR486C MRPL16P38064 232 aa9.72□□□□□ -0.85
VPS60YDR486C GRE3P38715 327 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
VPS60YDR486C YHR035WP38769 630 aa9.72□□□□□ -0.85
VPS60YDR486C MDM31P38880 579 aa9.72□□□□□ -0.85
VPS60YDR486C NAB3P38996 802 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
VPS60YDR486C SER3P40054 469 aa9.72□□□□□ -0.85
VPS60YDR486C IRC7P43623 340 aa9.72□□□□□ -0.85
VPS60YDR486C RPE1P46969 238 aa9.72□□□□□ -0.85
VPS60YDR486C EFM3P47163 339 aa9.72□□□□□ -0.85
VPS60YDR486C VPS73P53142 486 aaKnown RBP9.72□□□□□ -0.85
VPS60YDR486C MPP6P53725 186 aaPredicted RBP9.72□□□□□ -0.85
VPS60YDR486C PFA5Q03289 374 aa9.72□□□□□ -0.85
VPS60YDR486C FIN1Q03898 291 aa9.72□□□□□ -0.85
VPS60YDR486C SNX41Q04053 625 aa9.72□□□□□ -0.85
VPS60YDR486C PLM2Q04383 521 aa9.72□□□□□ -0.85
VPS60YDR486C MRX10Q05648 414 aa9.72□□□□□ -0.85
VPS60YDR486C FMP45Q07651 309 aa9.72□□□□□ -0.85
VPS60YDR486C NTG2Q08214 380 aa9.72□□□□□ -0.85
VPS60YDR486C RDR1Q08904 546 aa9.72□□□□□ -0.85
VPS60YDR486C YPL191CQ08930 360 aa9.72□□□□□ -0.85
VPS60YDR486C YOR289WQ12012 251 aaPredicted RBP9.72□□□□□ -0.85
VPS60YDR486C YRA1Q12159 226 aaKnown RBP9.72□□□□□ -0.85
VPS60YDR486C RLM1Q12224 676 aa9.72□□□□□ -0.85
VPS60YDR486C TRS65P32893 560 aa9.71□□□□□ -0.86
VPS60YDR486C SLC1P33333 303 aa9.71□□□□□ -0.86
VPS60YDR486C NIC96P34077 839 aa9.71□□□□□ -0.86
VPS60YDR486C NTA1P40354 457 aa9.71□□□□□ -0.86
VPS60YDR486C RBL2P48606 106 aaKnown RBP9.71□□□□□ -0.86
VPS60YDR486C COS10P52924 374 aa9.71□□□□□ -0.86
VPS60YDR486C TFB3Q03290 321 aa9.71□□□□□ -0.86
VPS60YDR486C GIS1Q03833 894 aa9.71□□□□□ -0.86
VPS60YDR486C RSA3Q05942 220 aaKnown RBP9.71□□□□□ -0.86
VPS60YDR486C BUR2Q05949 395 aa9.71□□□□□ -0.86
VPS60YDR486C NEJ1Q06148 342 aa9.71□□□□□ -0.86
VPS60YDR486C MLC2Q06580 163 aa9.71□□□□□ -0.86
VPS60YDR486C HDA2Q06629 674 aa9.71□□□□□ -0.86
VPS60YDR486C COQ10Q08058 207 aa9.71□□□□□ -0.86
VPS60YDR486C YOR389WQ08912 624 aa9.71□□□□□ -0.86
VPS60YDR486C YPL278CQ08990 100 aa9.71□□□□□ -0.86
VPS60YDR486C RBD2Q12270 262 aa9.71□□□□□ -0.86
VPS60YDR486C YOR032W-AQ8TGS1 66 aa9.71□□□□□ -0.86
VPS60YDR486C GLT1Q12680 2145 aaKnown RBP9.71□□□□□ -0.86
VPS60YDR486C RAS1P01119 309 aa9.7□□□□□ -0.86
VPS60YDR486C MDH1P17505 334 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
VPS60YDR486C PHO80P20052 293 aa9.7□□□□□ -0.86
VPS60YDR486C RPB8P20436 146 aa9.7□□□□□ -0.86
VPS60YDR486C NUP1P20676 1076 aa9.7□□□□□ -0.86
VPS60YDR486C YCR102CP25608 368 aa9.7□□□□□ -0.86
VPS60YDR486C PDR3P33200 976 aa9.7□□□□□ -0.86
VPS60YDR486C IES5P40060 125 aa9.7□□□□□ -0.86
VPS60YDR486C IRC5P43610 853 aa9.7□□□□□ -0.86
VPS60YDR486C SSY5P47002 699 aa9.7□□□□□ -0.86
VPS60YDR486C YJR098CP47139 656 aa9.7□□□□□ -0.86
VPS60YDR486C PGU1P47180 361 aa9.7□□□□□ -0.86
VPS60YDR486C RRN9P53437 365 aa9.7□□□□□ -0.86
VPS60YDR486C YDR209CQ03480 137 aa9.7□□□□□ -0.86
VPS60YDR486C YDR249CQ03787 373 aa9.7□□□□□ -0.86
VPS60YDR486C HRT1Q08273 121 aa9.7□□□□□ -0.86
VPS60YDR486C MDM32Q12171 622 aa9.7□□□□□ -0.86
VPS60YDR486C PCL9Q12477 304 aa9.7□□□□□ -0.86
VPS60YDR486C DPB2P24482 689 aaPredicted RBP9.69□□□□□ -0.86
VPS60YDR486C SUR1P33300 382 aa9.69□□□□□ -0.86
VPS60YDR486C HIS7P33734 552 aaKnown RBP9.69□□□□□ -0.86
VPS60YDR486C MSN4P33749 630 aa9.69□□□□□ -0.86
VPS60YDR486C TPO5P36029 618 aa9.69□□□□□ -0.86
VPS60YDR486C FET3P38993 636 aa9.69□□□□□ -0.86
VPS60YDR486C ECL1P48235 211 aa9.69□□□□□ -0.86
VPS60YDR486C MNT4P53745 580 aa9.69□□□□□ -0.86
VPS60YDR486C MAK3Q03503 176 aa9.69□□□□□ -0.86
VPS60YDR486C SPC19Q03954 165 aa9.69□□□□□ -0.86
VPS60YDR486C COX20Q04935 205 aa9.69□□□□□ -0.86
VPS60YDR486C SWM1Q12379 170 aa9.69□□□□□ -0.86
VPS60YDR486C SET6Q12529 373 aa9.69□□□□□ -0.86
VPS60YDR486C YGR161W-CQ3E744 92 aa9.69□□□□□ -0.86
VPS60YDR486C LSO1Q3E827 93 aa9.69□□□□□ -0.86
VPS60YDR486C CYT1P07143 309 aa9.68□□□□□ -0.86
VPS60YDR486C SEC62P21825 274 aa9.68□□□□□ -0.86
VPS60YDR486C SCO1P23833 295 aa9.68□□□□□ -0.86
VPS60YDR486C YCL002CP25565 263 aa9.68□□□□□ -0.86
VPS60YDR486C EHD3P28817 500 aa9.68□□□□□ -0.86
VPS60YDR486C MDH3P32419 343 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86not detected
VPS60YDR486C YKR073CP36153 106 aa9.68□□□□□ -0.86
VPS60YDR486C YER010CP40011 234 aa9.68□□□□□ -0.86
VPS60YDR486C BUR6P40096 142 aa9.68□□□□□ -0.86
VPS60YDR486C ECO1P43605 281 aa9.68□□□□□ -0.86
VPS60YDR486C SAM37P50110 327 aa9.68□□□□□ -0.86
VPS60YDR486C MRPL1Q04599 285 aa9.68□□□□□ -0.86
VPS60YDR486C YLR173WQ06247 608 aa9.68□□□□□ -0.86
VPS60YDR486C HNT3Q08702 217 aa9.68□□□□□ -0.86
VPS60YDR486C RKM1Q08961 583 aaPredicted RBP9.68□□□□□ -0.86
VPS60YDR486C YHR214C-DP0CX93 97 aa9.67□□□□□ -0.86
VPS60YDR486C AIM17P23180 465 aaKnown RBP9.67□□□□□ -0.86
VPS60YDR486C ERG8P24521 451 aa9.67□□□□□ -0.86
VPS60YDR486C SHE1P38200 338 aa9.67□□□□□ -0.86
VPS60YDR486C DDI1P40087 428 aa9.67□□□□□ -0.86
VPS60YDR486C NAS2P40555 220 aa9.67□□□□□ -0.86
VPS60YDR486C OGG1P53397 376 aaPredicted RBP9.67□□□□□ -0.86
VPS60YDR486C RRP17Q04031 235 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms