RNA–Protein interactions for RNA: YDR247W

VHS1, Transcript of Cytoplasmic serine/threonine protein kinase, yeastyeast

Gene VHS1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS1YDR247W SMF3Q12078 473 aaPredicted RBP5.12□□□□□ -1.59
VHS1YDR247W UBR1P19812 1950 aa5.11□□□□□ -1.59
VHS1YDR247W RAS2P01120 322 aaKnown RBP5.11□□□□□ -1.59
VHS1YDR247W CAP2P13517 287 aa5.11□□□□□ -1.59
VHS1YDR247W SEN2P16658 377 aa5.11□□□□□ -1.59
VHS1YDR247W GRX2P17695 143 aaKnown RBP5.11□□□□□ -1.59
VHS1YDR247W DAP2P18962 818 aa5.11□□□□□ -1.59
VHS1YDR247W SPT14P32363 452 aa5.11□□□□□ -1.59
VHS1YDR247W TKL2P33315 681 aa5.11□□□□□ -1.59
VHS1YDR247W URA8P38627 578 aaPredicted RBP5.11□□□□□ -1.59
VHS1YDR247W YHR045WP38775 560 aa5.11□□□□□ -1.59
VHS1YDR247W DHH1P39517 506 aaKnown RBP5.11□□□□□ -1.59
VHS1YDR247W GAB1P41733 394 aa5.11□□□□□ -1.59
VHS1YDR247W ZIM17P42844 174 aa5.11□□□□□ -1.59
VHS1YDR247W SER2P42941 309 aa5.11□□□□□ -1.59
VHS1YDR247W YGR126WP53274 230 aa5.11□□□□□ -1.59
VHS1YDR247W MRPL50P53724 139 aa5.11□□□□□ -1.59
VHS1YDR247W ECM11Q04110 302 aa5.11□□□□□ -1.59
VHS1YDR247W ROY1Q04847 553 aa5.11□□□□□ -1.59
VHS1YDR247W RBS1Q05672 457 aaKnown RBP5.11□□□□□ -1.59
VHS1YDR247W DBP9Q06218 594 aaKnown RBP5.11□□□□□ -1.59
VHS1YDR247W GRS2Q06817 618 aa5.11□□□□□ -1.59
VHS1YDR247W YLL007CQ07799 665 aa5.11□□□□□ -1.59
VHS1YDR247W YLR126CQ12288 251 aa5.11□□□□□ -1.59
VHS1YDR247W SNF8Q12483 233 aa5.11□□□□□ -1.59
VHS1YDR247W YBR298C-AQ8TGK4 73 aa5.11□□□□□ -1.59
VHS1YDR247W SPT3P06844 337 aa5.1□□□□□ -1.59
VHS1YDR247W DST1P07273 309 aa5.1□□□□□ -1.59
VHS1YDR247W SAR1P20606 190 aaKnown RBP5.1□□□□□ -1.59
VHS1YDR247W RSA4P25382 515 aaKnown RBP5.1□□□□□ -1.59
VHS1YDR247W COQ3P27680 312 aa5.1□□□□□ -1.59
VHS1YDR247W ASF2P32448 525 aaPredicted RBP5.1□□□□□ -1.59
VHS1YDR247W IMP3P32899 183 aaPredicted RBP5.1□□□□□ -1.59
VHS1YDR247W PPQ1P32945 549 aa5.1□□□□□ -1.59
VHS1YDR247W MTR2P34232 184 aaKnown RBP5.1□□□□□ -1.59
VHS1YDR247W YBR242WP38331 238 aa5.1□□□□□ -1.59
VHS1YDR247W ATG7P38862 630 aa5.1□□□□□ -1.59
VHS1YDR247W MEP2P41948 499 aa5.1□□□□□ -1.59
VHS1YDR247W TIS11P47977 285 aa5.1□□□□□ -1.59
VHS1YDR247W SHY1P53266 389 aa5.1□□□□□ -1.59
VHS1YDR247W YGR168CP53293 376 aa5.1□□□□□ -1.59
VHS1YDR247W RRN5Q02983 363 aa5.1□□□□□ -1.59
VHS1YDR247W MCP2Q06567 569 aa5.1□□□□□ -1.59
VHS1YDR247W PEX27Q08580 376 aa5.1□□□□□ -1.59
VHS1YDR247W RAX1Q08760 435 aa5.1□□□□□ -1.59
VHS1YDR247W GTT2Q12390 233 aa5.1□□□□□ -1.59
VHS1YDR247W YDL199CQ12407 687 aa5.1□□□□□ -1.59
VHS1YDR247W RPL31BP0C2H9 113 aaKnown RBP5.09□□□□□ -1.59
VHS1YDR247W GAL3P13045 520 aa5.09□□□□□ -1.59
VHS1YDR247W HOM2P13663 365 aaKnown RBP5.09□□□□□ -1.59
VHS1YDR247W PHO84P25297 587 aaKnown RBP5.09□□□□□ -1.59
VHS1YDR247W ELO2P25358 347 aa5.09□□□□□ -1.59
VHS1YDR247W DCC1P25559 380 aa5.09□□□□□ -1.59
VHS1YDR247W YKL063CP35725 167 aa5.09□□□□□ -1.59
VHS1YDR247W FLO10P36170 1169 aa5.09□□□□□ -1.59
VHS1YDR247W VMA7P39111 118 aa5.09□□□□□ -1.59
VHS1YDR247W YER034WP40022 185 aaKnown RBP5.09□□□□□ -1.59
VHS1YDR247W PCL6P40038 420 aa5.09□□□□□ -1.59
VHS1YDR247W SER3P40054 469 aa5.09□□□□□ -1.59
VHS1YDR247W YKE4P40544 346 aa5.09□□□□□ -1.59
VHS1YDR247W YGR210CP42942 411 aa5.09□□□□□ -1.59
VHS1YDR247W MRH4P53166 561 aa5.09□□□□□ -1.59
VHS1YDR247W PRM8P53174 237 aa5.09□□□□□ -1.59
VHS1YDR247W NQM1P53228 333 aaPredicted RBP5.09□□□□□ -1.59
VHS1YDR247W YNL134CP53912 376 aaKnown RBP5.09□□□□□ -1.59
VHS1YDR247W KAP120Q02932 1032 aa5.09□□□□□ -1.59
VHS1YDR247W YMD8Q03697 442 aa5.09□□□□□ -1.59
VHS1YDR247W YOL131WQ08270 108 aa5.09□□□□□ -1.59
VHS1YDR247W YPR1Q12458 312 aa5.09□□□□□ -1.59
VHS1YDR247W RRI1Q12468 440 aa5.09□□□□□ -1.59
VHS1YDR247W FMP16Q12497 93 aa5.09□□□□□ -1.59
VHS1YDR247W ISN1Q99312 450 aa5.09□□□□□ -1.59
VHS1YDR247W MDH1P17505 334 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
VHS1YDR247W RPB8P20436 146 aa5.08□□□□□ -1.6
VHS1YDR247W CSE2P33308 149 aa5.08□□□□□ -1.6
VHS1YDR247W ZRT3P34240 503 aa5.08□□□□□ -1.6
VHS1YDR247W RCK1P38622 512 aa5.08□□□□□ -1.6
VHS1YDR247W UBA4P38820 440 aa5.08□□□□□ -1.6
VHS1YDR247W RPH1P39956 796 aa5.08□□□□□ -1.6
VHS1YDR247W SPO73P40031 143 aa5.08□□□□□ -1.6
VHS1YDR247W ALG8P40351 577 aa5.08□□□□□ -1.6
VHS1YDR247W MPM1P40364 252 aa5.08□□□□□ -1.6
VHS1YDR247W TES1P41903 349 aaKnown RBP5.08□□□□□ -1.6
VHS1YDR247W SNO3P43544 222 aa5.08□□□□□ -1.6
VHS1YDR247W ALK1P43633 760 aaKnown RBP5.08□□□□□ -1.6
VHS1YDR247W BUD13P46947 266 aaPredicted RBP5.08□□□□□ -1.6
VHS1YDR247W AIM22P47051 409 aa5.08□□□□□ -1.6
VHS1YDR247W GPI8P49018 411 aa5.08□□□□□ -1.6
VHS1YDR247W TOM22P49334 152 aa5.08□□□□□ -1.6
VHS1YDR247W PYK2P52489 506 aaKnown RBP5.08□□□□□ -1.6
VHS1YDR247W DUG3P53871 357 aa5.08□□□□□ -1.6
VHS1YDR247W IDP3P53982 420 aaKnown RBP5.08□□□□□ -1.6
VHS1YDR247W FRE7Q12333 620 aa5.08□□□□□ -1.6
VHS1YDR247W RTR2Q12378 196 aa5.08□□□□□ -1.6
VHS1YDR247W HIS3P06633 220 aa5.07□□□□□ -1.6
VHS1YDR247W PRP2P20095 876 aaPredicted RBP5.07□□□□□ -1.6
VHS1YDR247W PPH22P23595 377 aa5.07□□□□□ -1.6
VHS1YDR247W MNE1P24720 663 aa5.07□□□□□ -1.6
VHS1YDR247W PEX34P25584 144 aa5.07□□□□□ -1.6
VHS1YDR247W TUL1P36096 758 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms