RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	ARG80	P07249	177 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	NAM2	P11325	894 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	MER1	P16523	270 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	ERG4	P25340	473 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	STE50	P25344	346 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
UPC2	YDR213W	ITR1	P30605	584 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	MRPL9	P31334	269 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	YBR063C	P38083	404 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	RTC2	P38279	296 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	YBR238C	P38330	731 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	GND1	P38720	489 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	YIR016W	P40572	265 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	GPP1	P41277	250 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	SCS3	P53012	380 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	PEX31	P53203	462 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	VOA1	P53262	265 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	MNT4	P53745	580 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	SKO1	Q02100	647 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	TDA1	Q03533	586 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	SSL1	Q04673	461 aa	Predicted RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	YMR321C	Q04898	105 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	ECM22	Q05958	814 aa	Predicted RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	YLR346C	Q06139	101 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	ECM7	Q06200	448 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	YOR352W	Q08816	343 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	RAD28	Q12021	506 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	PUS9	Q12069	462 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	YOL114C	Q12322	202 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	ERG27	Q12452	347 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	SOD2	P00447	233 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	KIN28	P06242	306 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	ZWF1	P11412	505 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	ERD2	P18414	219 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	ARE1	P25628	610 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	EMP24	P32803	203 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	ATG8	P38182	117 aa	RIP-Chip data	4.01	□□□□□ -1.77	not detected
UPC2	YDR213W	IKI1	P38874	309 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	RMD6	P39975	231 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	HMF1	P40037	129 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	PFA3	P42836	336 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	LYS20	P48570	428 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	ATG38	Q05789	226 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	NMA1	Q06178	401 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	THI73	Q07904	523 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	BRX1	Q08235	291 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	FMP40	Q08968	688 aa	Predicted RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	VMA9	Q3E7B6	73 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YLR149C	Q99296	730 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	GLK1	P17709	500 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	DCC1	P25559	380 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YCL002C	P25565	263 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	SFC1	P33303	322 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	MTH1	P35198	433 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	SHM2	P37291	469 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	RGI2	P40188	164 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	NIT1	P40447	199 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	SDT1	P53078	280 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	HHO1	P53551	258 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	FRE4	P53746	719 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	MRPL22	P53881	309 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	HXT11	P54862	567 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YDR109C	Q04585	715 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	GUD1	Q07729	489 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YOR114W	Q12219	294 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YPR014C	Q6B0W2	109 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	GPI12	P23797	304 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YIM1	P28625	365 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	FUN26	P31381	517 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	UIP5	P36137	443 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	SOL2	P37262	315 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	TAT1	P38085	619 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	COS8	P38723	381 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	ALP1	P38971	573 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	PFS2	P42841	465 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	IRC7	P43623	340 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	SNG1	P46950	547 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	NIT2	P47016	307 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YJR030C	P47101	745 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YAP1802	P53309	568 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	TRM112	P53738	135 aa	Predicted RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	YMR130W	Q04223	302 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	ANT1	Q06497	328 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	YLR036C	Q07986	203 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	TRM8	Q12009	286 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	SFM1	Q12314	213 aa		4.01	□□□□□ -1.77
UPC2	YDR213W	PAA1	Q12447	191 aa	Known RBP	4.01	□□□□□ -1.77
UPC2	YDR213W	GCD1	P09032	578 aa	Predicted RBP	4	□□□□□ -1.77
UPC2	YDR213W	ERD1	P16151	362 aa		4	□□□□□ -1.77
UPC2	YDR213W	MF(ALPHA)2	P32435	120 aa		4	□□□□□ -1.77
UPC2	YDR213W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
UPC2	YDR213W	PEX32	P38292	413 aa		4	□□□□□ -1.77
UPC2	YDR213W	BUR6	P40096	142 aa		4	□□□□□ -1.77
UPC2	YDR213W	POP1	P41812	875 aa		4	□□□□□ -1.77
UPC2	YDR213W	SHY1	P53266	389 aa		4	□□□□□ -1.77
UPC2	YDR213W	YNR065C	P53751	1116 aa		4	□□□□□ -1.77
UPC2	YDR213W	YCL001W-A	P87012	153 aa		4	□□□□□ -1.77
UPC2	YDR213W	RNH1	Q04740	348 aa		4	□□□□□ -1.77
UPC2	YDR213W	MDM30	Q05930	598 aa		4	□□□□□ -1.77
UPC2	YDR213W	MHT1	Q12525	324 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms