RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YDL085C-AQ3E7B7 68 aaKnown RBP3.93□□□□□ -1.78
TRS85YDR108W ATP5P09457 212 aa3.93□□□□□ -1.78
TRS85YDR108W YEL076C-AP0CX16 216 aa3.93□□□□□ -1.78
TRS85YDR108W YLR464WP0CX17 216 aa3.93□□□□□ -1.78
TRS85YDR108W CDC34P14682 295 aa3.93□□□□□ -1.78
TRS85YDR108W MAK31P23059 88 aa3.93□□□□□ -1.78
TRS85YDR108W YCR102CP25608 368 aa3.93□□□□□ -1.78
TRS85YDR108W TAH1P25638 111 aaPredicted RBP3.93□□□□□ -1.78
TRS85YDR108W PRP45P28004 379 aaPredicted RBP3.93□□□□□ -1.78
TRS85YDR108W SPS19P32573 292 aaKnown RBP3.93□□□□□ -1.78
TRS85YDR108W SKG6P32900 734 aaPredicted RBP3.93□□□□□ -1.78
TRS85YDR108W MRPL6P32904 214 aa3.93□□□□□ -1.78
TRS85YDR108W DUT1P33317 147 aa3.93□□□□□ -1.78
TRS85YDR108W FRE2P36033 711 aa3.93□□□□□ -1.78
TRS85YDR108W GPT2P36148 743 aa3.93□□□□□ -1.78
TRS85YDR108W MRPL28P36527 147 aa3.93□□□□□ -1.78
TRS85YDR108W FIG1P38224 298 aa3.93□□□□□ -1.78
TRS85YDR108W FAA3P39002 694 aa3.93□□□□□ -1.78
TRS85YDR108W YEL076CP39971 216 aa3.93□□□□□ -1.78
TRS85YDR108W HPA3P39979 161 aa3.93□□□□□ -1.78
TRS85YDR108W BUR6P40096 142 aa3.93□□□□□ -1.78
TRS85YDR108W GAB1P41733 394 aa3.93□□□□□ -1.78
TRS85YDR108W BAP3P41815 604 aa3.93□□□□□ -1.78
TRS85YDR108W SSU1P41930 458 aa3.93□□□□□ -1.78
TRS85YDR108W PRM10P42946 383 aa3.93□□□□□ -1.78
TRS85YDR108W TAD2P47058 250 aa3.93□□□□□ -1.78
TRS85YDR108W YJR011CP47086 261 aaPredicted RBP3.93□□□□□ -1.78
TRS85YDR108W YJR012CP47087 207 aa3.93□□□□□ -1.78
TRS85YDR108W NBP35P52920 328 aa3.93□□□□□ -1.78
TRS85YDR108W YNR061CP53747 219 aa3.93□□□□□ -1.78
TRS85YDR108W YPL014WQ02606 381 aa3.93□□□□□ -1.78
TRS85YDR108W YPL067CQ02754 198 aa3.93□□□□□ -1.78
TRS85YDR108W STD1Q02794 444 aa3.93□□□□□ -1.78
TRS85YDR108W CUE4Q04201 117 aaPredicted RBP3.93□□□□□ -1.78
TRS85YDR108W SEC13Q04491 297 aaKnown RBP3.93□□□□□ -1.78
TRS85YDR108W YDR222WQ04925 415 aa3.93□□□□□ -1.78
TRS85YDR108W ECM30Q06673 1274 aa3.93□□□□□ -1.78
TRS85YDR108W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
TRS85YDR108W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
TRS85YDR108W TFC7Q12415 435 aa3.93□□□□□ -1.78
TRS85YDR108W EAF3Q12432 401 aa3.93□□□□□ -1.78
TRS85YDR108W CBP1P07252 654 aa3.92□□□□□ -1.78
TRS85YDR108W ASP3-2P0CX77 362 aa3.92□□□□□ -1.78
TRS85YDR108W ASP3-3P0CX78 362 aa3.92□□□□□ -1.78
TRS85YDR108W ASP3-4P0CX79 362 aa3.92□□□□□ -1.78
TRS85YDR108W ASP3-1P0CZ17 362 aa3.92□□□□□ -1.78
TRS85YDR108W ERD2P18414 219 aa3.92□□□□□ -1.78
TRS85YDR108W ZRC1P20107 442 aa3.92□□□□□ -1.78
TRS85YDR108W PRE9P23638 258 aaKnown RBP3.92□□□□□ -1.78
TRS85YDR108W PUP3P25451 205 aaKnown RBP3.92□□□□□ -1.78
TRS85YDR108W BUB2P26448 306 aaPredicted RBP3.92□□□□□ -1.78
TRS85YDR108W MOT2P34909 587 aaKnown RBP3.92□□□□□ -1.78
TRS85YDR108W TVP38P36164 337 aa3.92□□□□□ -1.78
TRS85YDR108W DTR1P38125 572 aa3.92□□□□□ -1.78
TRS85YDR108W LRP1P38801 184 aaKnown RBP3.92□□□□□ -1.78
TRS85YDR108W MDM31P38880 579 aa3.92□□□□□ -1.78
TRS85YDR108W PHO90P39535 881 aa3.92□□□□□ -1.78
TRS85YDR108W SLZ1P40167 298 aa3.92□□□□□ -1.78
TRS85YDR108W POG1P40473 351 aa3.92□□□□□ -1.78
TRS85YDR108W YJL218WP40892 196 aaKnown RBP3.92□□□□□ -1.78
TRS85YDR108W OPT1P40897 799 aa3.92□□□□□ -1.78
TRS85YDR108W DAN1P47178 298 aa3.92□□□□□ -1.78
TRS85YDR108W NUP57P48837 541 aa3.92□□□□□ -1.78
TRS85YDR108W DIA3P52290 468 aa3.92□□□□□ -1.78
TRS85YDR108W STR3P53101 465 aaKnown RBP3.92□□□□□ -1.78
TRS85YDR108W MKC7P53379 596 aa3.92□□□□□ -1.78
TRS85YDR108W YPR003CP53394 754 aa3.92□□□□□ -1.78
TRS85YDR108W EOS1P53938 366 aa3.92□□□□□ -1.78
TRS85YDR108W YPL080CQ02826 108 aa3.92□□□□□ -1.78
TRS85YDR108W UGO1Q03327 502 aa3.92□□□□□ -1.78
TRS85YDR108W CTK1Q03957 528 aaKnown RBP3.92□□□□□ -1.78
TRS85YDR108W YMR034CQ05131 434 aaPredicted RBP3.92□□□□□ -1.78
TRS85YDR108W MSC3Q05812 728 aa3.92□□□□□ -1.78
TRS85YDR108W RRT8Q08219 342 aa3.92□□□□□ -1.78
TRS85YDR108W YDR056CQ12025 205 aa3.92□□□□□ -1.78
TRS85YDR108W RGT2Q12300 763 aa3.92□□□□□ -1.78
TRS85YDR108W MRX4Q12467 430 aa3.92□□□□□ -1.78
TRS85YDR108W PRM4Q12498 284 aa3.92□□□□□ -1.78
TRS85YDR108W PET20Q99373 253 aa3.92□□□□□ -1.78
TRS85YDR108W THP2O13539 261 aaKnown RBP3.91□□□□□ -1.78
TRS85YDR108W HAP2P06774 265 aa3.91□□□□□ -1.78
TRS85YDR108W DDI2P0CH63 225 aa3.91□□□□□ -1.78
TRS85YDR108W DDI3P0CH64 225 aa3.91□□□□□ -1.78
TRS85YDR108W NHP6AP11632 93 aaKnown RBP3.91□□□□□ -1.78
TRS85YDR108W PET18P25362 215 aa3.91□□□□□ -1.78
TRS85YDR108W EHD3P28817 500 aa3.91□□□□□ -1.78
TRS85YDR108W CYS3P31373 394 aaKnown RBP3.91□□□□□ -1.78
TRS85YDR108W ARP2P32381 391 aaKnown RBP3.91□□□□□ -1.78
TRS85YDR108W EMP24P32803 203 aaKnown RBP3.91□□□□□ -1.78
TRS85YDR108W NGR1P32831 672 aaKnown RBP3.91□□□□□ -1.78
TRS85YDR108W SDH3P33421 198 aa3.91□□□□□ -1.78
TRS85YDR108W COS9P36034 407 aa3.91□□□□□ -1.78
TRS85YDR108W YBL029WP38201 376 aa3.91□□□□□ -1.78
TRS85YDR108W YBR184WP38299 523 aa3.91□□□□□ -1.78
TRS85YDR108W ATG12P38316 186 aa3.91□□□□□ -1.78
TRS85YDR108W RCK1P38622 512 aa3.91□□□□□ -1.78
TRS85YDR108W GIP2P40036 548 aa3.91□□□□□ -1.78
TRS85YDR108W COG3P40094 801 aa3.91□□□□□ -1.78
TRS85YDR108W YIL161WP40449 235 aaKnown RBP3.91□□□□□ -1.78
TRS85YDR108W VMA21P41806 77 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 86.2 ms