RNA–Protein interactions for RNA: YDL090C

RAM1, Transcript of Beta subunit of the CAAX farnesyltransferase (FTase), yeast

Gene RAM1, Length 1,296 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAM1	YDL090C	RPN6	Q12377	434 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	YER078W-A	Q3E7A2	54 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	ESP1	Q03018	1630 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	MDS3	P53094	1487 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	RPS8A	P0CX39	200 aa	Known RBP	4.57	□□□□□ -1.68
RAM1	YDL090C	RPS8B	P0CX40	200 aa	Known RBP	4.57	□□□□□ -1.68
RAM1	YDL090C	RAD51	P25454	400 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	HSM3	P38348	480 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	HIS2	P38635	335 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	YJL118W	P47022	219 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	LSB1	P53281	241 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	RRN11	Q04712	507 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	YLR173W	Q06247	608 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	TSR1	Q07381	788 aa	Known RBP	4.57	□□□□□ -1.68
RAM1	YDL090C	YOR387C	Q08910	206 aa		4.57	□□□□□ -1.68
RAM1	YDL090C	SGT2	Q12118	346 aa	Known RBP	4.57	□□□□□ -1.68
RAM1	YDL090C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
RAM1	YDL090C	ITR2	P30606	609 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	FUN26	P31381	517 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	IMP3	P32899	183 aa	Predicted RBP	4.56	□□□□□ -1.68
RAM1	YDL090C	CTM1	P38818	585 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	MAM33	P40513	266 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	CWC25	P53854	179 aa	Known RBP	4.56	□□□□□ -1.68
RAM1	YDL090C	TRM82	Q03774	444 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	COX20	Q04935	205 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	ARV1	Q06541	321 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	YDL109C	Q12103	647 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	APC9	Q12107	265 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	YDL199C	Q12407	687 aa		4.56	□□□□□ -1.68
RAM1	YDL090C	NUP157	P40064	1391 aa	Known RBP	4.55	□□□□□ -1.68
RAM1	YDL090C	ESC1	Q03661	1658 aa	Known RBP	4.55	□□□□□ -1.68
RAM1	YDL090C	POL30	P15873	258 aa	Known RBP	4.55	□□□□□ -1.68
RAM1	YDL090C	RPL16A	P26784	199 aa	Known RBP	4.55	□□□□□ -1.68
RAM1	YDL090C	ZRT1	P32804	376 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	COS9	P36034	407 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	SWD2	P36104	329 aa	Predicted RBP	4.55	□□□□□ -1.68
RAM1	YDL090C	HAC1	P41546	238 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	YGR210C	P42942	411 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	AGP3	P43548	558 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	LIA1	P47120	325 aa	Known RBP	4.55	□□□□□ -1.68
RAM1	YDL090C	MTQ1	P53944	314 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	IRC4	Q03036	179 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	YDL114W	Q07530	308 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	DDC1	Q08949	612 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	FRE8	Q12209	686 aa		4.55	□□□□□ -1.68
RAM1	YDL090C	HTZ1	Q12692	134 aa	Known RBP	4.55	□□□□□ -1.68
RAM1	YDL090C	HIR3	P47171	1648 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	RPL23A	P0CX41	137 aa	Known RBP	4.54	□□□□□ -1.68
RAM1	YDL090C	RPL23B	P0CX42	137 aa	Known RBP	4.54	□□□□□ -1.68
RAM1	YDL090C	MSI1	P13712	422 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	YSR3	P23501	404 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	RCK2	P38623	610 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	YHR045W	P38775	560 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	NDT80	P38830	627 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	KEL2	P50090	882 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	MST27	P53176	234 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	REX2	P54964	269 aa	Known RBP	4.54	□□□□□ -1.68
RAM1	YDL090C	SED5	Q01590	340 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	MRS2	Q01926	470 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	RTN1	Q04947	295 aa	Known RBP	4.54	□□□□□ -1.68
RAM1	YDL090C	CTS2	Q06350	511 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	ERP3	Q12403	225 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	SNQ2	P32568	1501 aa	Known RBP	4.54	□□□□□ -1.68
RAM1	YDL090C	YOR1	P53049	1477 aa		4.54	□□□□□ -1.68
RAM1	YDL090C	HEM4	P06174	275 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	RPS14A	P06367	137 aa	Known RBP	4.53	□□□□□ -1.68
RAM1	YDL090C	RPS18A	P0CX55	146 aa	Known RBP	4.53	□□□□□ -1.68
RAM1	YDL090C	RPS18B	P0CX56	146 aa	Predicted RBP	4.53	□□□□□ -1.68
RAM1	YDL090C	NAM2	P11325	894 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	MEI5	P32489	222 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	GCG1	P32656	232 aa	Known RBP	4.53	□□□□□ -1.68
RAM1	YDL090C	CSE2	P33308	149 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	SDH3	P33421	198 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	TAE1	P38340	232 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	RPS14B	P39516	138 aa	Known RBP	4.53	□□□□□ -1.68
RAM1	YDL090C	PRM9	P39551	298 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	HEM14	P40012	539 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	DFG10	P40526	253 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	HCH1	P53834	153 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	YHC1	Q05900	231 aa	Known RBP	4.53	□□□□□ -1.68
RAM1	YDL090C	BOP2	Q06150	570 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	GPN3	Q06543	272 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	BER1	Q06688	274 aa	Known RBP	4.53	□□□□□ -1.68
RAM1	YDL090C	MFG1	Q07684	458 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	RBD2	Q12270	262 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	ERV2	Q12284	196 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	MET5	P47169	1442 aa		4.53	□□□□□ -1.68
RAM1	YDL090C	ARO1	P08566	1588 aa	Known RBP	4.53	□□□□□ -1.69
RAM1	YDL090C	BPT1	P14772	1559 aa		4.53	□□□□□ -1.69
RAM1	YDL090C	SSK22	P25390	1331 aa	Predicted RBP	4.52	□□□□□ -1.69
RAM1	YDL090C	COX2	P00410	251 aa		4.52	□□□□□ -1.69
RAM1	YDL090C	REP1	P03871	373 aa		4.52	□□□□□ -1.69
RAM1	YDL090C	MSF1	P08425	469 aa		4.52	□□□□□ -1.69
RAM1	YDL090C	SPS100	P13130	326 aa		4.52	□□□□□ -1.69
RAM1	YDL090C	CDC42	P19073	191 aa		4.52	□□□□□ -1.69
RAM1	YDL090C	SKG6	P32900	734 aa	Predicted RBP	4.52	□□□□□ -1.69
RAM1	YDL090C	YHR035W	P38769	630 aa		4.52	□□□□□ -1.69
RAM1	YDL090C	YNL320W	P42840	284 aa		4.52	□□□□□ -1.69
RAM1	YDL090C	KAP114	P53067	1004 aa		4.52	□□□□□ -1.69
RAM1	YDL090C	YMR027W	Q04371	470 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms