RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCR1	SCR1	THO1	P40040	218 aa	Known RBP	13.17	□□□□□ -0.3
SCR1	SCR1	RFC4	P40339	323 aa	Known RBP	13.17	□□□□□ -0.3
SCR1	SCR1	YNR040W	P53736	256 aa		13.17	□□□□□ -0.3
SCR1	SCR1	SCS7	Q03529	384 aa		13.17	□□□□□ -0.3
SCR1	SCR1	RSA1	Q08932	381 aa		13.17	□□□□□ -0.3
SCR1	SCR1	RHO1	P06780	209 aa	Known RBP	13.16	□□□□□ -0.3
SCR1	SCR1	YOL162W	P0CF19	215 aa		13.16	□□□□□ -0.3
SCR1	SCR1	HMG1	P12683	1054 aa		13.16	□□□□□ -0.3
SCR1	SCR1	FBA1	P14540	359 aa	Known RBP	13.16	□□□□□ -0.3
SCR1	SCR1	CTF8	P38877	133 aa		13.16	□□□□□ -0.3
SCR1	SCR1	GDI1	P39958	451 aa	Known RBP	13.16	□□□□□ -0.3
SCR1	SCR1	TOK1	P40310	691 aa		13.16	□□□□□ -0.3
SCR1	SCR1	PRM8	P53174	237 aa		13.16	□□□□□ -0.3
SCR1	SCR1	YNR062C	P53748	327 aa		13.16	□□□□□ -0.3
SCR1	SCR1	NIP7	Q08962	181 aa	Known RBP	13.16	□□□□□ -0.3
SCR1	SCR1	SET6	Q12529	373 aa		13.16	□□□□□ -0.3
SCR1	SCR1	MHF1	Q3E835	90 aa		13.16	□□□□□ -0.3
SCR1	SCR1	MRPL6	P32904	214 aa		13.15	□□□□□ -0.3
SCR1	SCR1	NIC96	P34077	839 aa		13.15	□□□□□ -0.3
SCR1	SCR1	MDJ1	P35191	511 aa		13.15	□□□□□ -0.3
SCR1	SCR1	SPO73	P40031	143 aa		13.15	□□□□□ -0.3
SCR1	SCR1	CHA4	P43634	648 aa		13.15	□□□□□ -0.3
SCR1	SCR1	LYS5	P50113	272 aa		13.15	□□□□□ -0.3
SCR1	SCR1	MKC7	P53379	596 aa		13.15	□□□□□ -0.3
SCR1	SCR1	SNF12	P53628	566 aa		13.15	□□□□□ -0.3
SCR1	SCR1	DML1	Q03652	475 aa		13.15	□□□□□ -0.3
SCR1	SCR1	RAF1	Q06891	181 aa		13.15	□□□□□ -0.3
SCR1	SCR1	YOR343C	Q12484	108 aa		13.15	□□□□□ -0.3
SCR1	SCR1	SIR3	P06701	978 aa		13.14	□□□□□ -0.31
SCR1	SCR1	YAR028W	P39548	234 aa		13.14	□□□□□ -0.31
SCR1	SCR1	FMP33	P46998	180 aa		13.14	□□□□□ -0.31
SCR1	SCR1	YGL101W	P53144	215 aa		13.14	□□□□□ -0.31
SCR1	SCR1	MRPL1	Q04599	285 aa		13.14	□□□□□ -0.31
SCR1	SCR1	SNO4	Q04902	237 aa		13.14	□□□□□ -0.31
SCR1	SCR1	YPR147C	Q06522	304 aa	Known RBP	13.14	□□□□□ -0.31
SCR1	SCR1	HSP33	Q08914	237 aa	Known RBP	13.14	□□□□□ -0.31
SCR1	SCR1	HSP32	Q08992	237 aa		13.14	□□□□□ -0.31
SCR1	SCR1	DPM1	P14020	267 aa	Known RBP	13.13	□□□□□ -0.31
SCR1	SCR1	BUD5	P25300	642 aa	Predicted RBP	13.13	□□□□□ -0.31
SCR1	SCR1	SBA1	P28707	216 aa	Known RBP	13.13	□□□□□ -0.31
SCR1	SCR1	PTH1	P38876	190 aa	Known RBP	13.13	□□□□□ -0.31
SCR1	SCR1	SEN34	P39707	275 aa		13.13	□□□□□ -0.31
SCR1	SCR1	MRPL19	P53875	158 aa		13.13	□□□□□ -0.31
SCR1	SCR1	YDL180W	Q12301	547 aa		13.13	□□□□□ -0.31
SCR1	SCR1	DBP10	Q12389	995 aa	Known RBP	13.13	□□□□□ -0.31
SCR1	SCR1	HEM4	P06174	275 aa		13.12	□□□□□ -0.31
SCR1	SCR1	SNF4	P12904	322 aa		13.12	□□□□□ -0.31
SCR1	SCR1	ERP6	P53198	216 aa		13.12	□□□□□ -0.31
SCR1	SCR1	ABZ2	Q03266	374 aa		13.12	□□□□□ -0.31
SCR1	SCR1	YMR226C	Q05016	267 aa	Known RBP	13.12	□□□□□ -0.31
SCR1	SCR1	RIB3	Q99258	208 aa		13.12	□□□□□ -0.31
SCR1	SCR1	RPB8	P20436	146 aa		13.11	□□□□□ -0.31
SCR1	SCR1	UBC8	P28263	218 aa		13.11	□□□□□ -0.31
SCR1	SCR1	KRE29	P40026	464 aa		13.11	□□□□□ -0.31
SCR1	SCR1	MRK1	P50873	501 aa		13.11	□□□□□ -0.31
SCR1	SCR1	COS1	P53822	381 aa		13.11	□□□□□ -0.31
SCR1	SCR1	RVB1	Q03940	463 aa	Known RBP	13.11	□□□□□ -0.31
SCR1	SCR1	FOL3	Q12676	427 aa	Predicted RBP	13.11	□□□□□ -0.31
SCR1	SCR1	YAK1	P14680	807 aa		13.1	□□□□□ -0.31
SCR1	SCR1	PRP19	P32523	503 aa	Known RBP	13.1	□□□□□ -0.31
SCR1	SCR1	DTD1	Q07648	150 aa	Known RBP	13.1	□□□□□ -0.31
SCR1	SCR1	SPC3	Q12133	184 aa		13.1	□□□□□ -0.31
SCR1	SCR1	YLR126C	Q12288	251 aa		13.1	□□□□□ -0.31
SCR1	SCR1	YDL007C-A	Q2V2Q0	85 aa		13.1	□□□□□ -0.31
SCR1	SCR1	CDC39	P25655	2108 aa	Known RBP	13.1	□□□□□ -0.31
SCR1	SCR1	SNF6	P18888	332 aa		13.09	□□□□□ -0.31
SCR1	SCR1	PRE2	P30656	287 aa	Known RBP	13.09	□□□□□ -0.31
SCR1	SCR1	COS9	P36034	407 aa		13.09	□□□□□ -0.31
SCR1	SCR1	YKL077W	P36081	392 aa		13.09	□□□□□ -0.31
SCR1	SCR1	RPP1	P38786	293 aa		13.09	□□□□□ -0.31
SCR1	SCR1	YMR144W	P40214	342 aa	Known RBP	13.09	□□□□□ -0.31
SCR1	SCR1	IRC7	P43623	340 aa		13.09	□□□□□ -0.31
SCR1	SCR1	ILM1	P47155	203 aa		13.09	□□□□□ -0.31
SCR1	SCR1	ASI1	P54074	624 aa		13.09	□□□□□ -0.31
SCR1	SCR1	KAP120	Q02932	1032 aa		13.09	□□□□□ -0.31
SCR1	SCR1	COQ11	Q05892	277 aa		13.09	□□□□□ -0.31
SCR1	SCR1	UIP4	Q08926	304 aa		13.09	□□□□□ -0.31
SCR1	SCR1	PRB1	P09232	635 aa		13.08	□□□□□ -0.32
SCR1	SCR1	THI4	P32318	326 aa		13.08	□□□□□ -0.32
SCR1	SCR1	SOF1	P33750	489 aa	Known RBP	13.08	□□□□□ -0.32
SCR1	SCR1	RPS20	P38701	121 aa	Known RBP	13.08	□□□□□ -0.32
SCR1	SCR1	YER184C	P39961	794 aa		13.08	□□□□□ -0.32
SCR1	SCR1	PRE6	P40303	254 aa	Known RBP	13.08	□□□□□ -0.32
SCR1	SCR1	EXG2	P52911	562 aa		13.08	□□□□□ -0.32
SCR1	SCR1	ASI2	P53895	289 aa		13.08	□□□□□ -0.32
SCR1	SCR1	YMR265C	Q03508	461 aa	Known RBP	13.08	□□□□□ -0.32
SCR1	SCR1	BLM10	P43583	2143 aa		13.07	□□□□□ -0.32
SCR1	SCR1	RPC40	P07703	335 aa	Known RBP	13.07	□□□□□ -0.32
SCR1	SCR1	TFS1	P14306	219 aa		13.07	□□□□□ -0.32
SCR1	SCR1	SPO7	P18410	259 aa		13.07	□□□□□ -0.32
SCR1	SCR1	POL4	P25615	582 aa		13.07	□□□□□ -0.32
SCR1	SCR1	MCM10	P32354	571 aa		13.07	□□□□□ -0.32
SCR1	SCR1	AST1	P35183	429 aa		13.07	□□□□□ -0.32
SCR1	SCR1	SNL1	P40548	159 aa		13.07	□□□□□ -0.32
SCR1	SCR1	GPP1	P41277	250 aa	Known RBP	13.07	□□□□□ -0.32
SCR1	SCR1	IDP2	P41939	412 aa		13.07	□□□□□ -0.32
SCR1	SCR1	DAM1	P53267	343 aa		13.07	□□□□□ -0.32
SCR1	SCR1	RPI1	P23250	407 aa	Known RBP	13.06	□□□□□ -0.32
SCR1	SCR1	PTP2	P29461	750 aa		13.06	□□□□□ -0.32
SCR1	SCR1	CAM1	P29547	415 aa	Known RBP	13.06	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms