RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 ANKRD20A1Q5TYW2 823 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 ANKRD20A3Q5VUR7 823 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 PRR5LQ6MZQ0 368 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CCDC62Q6P9F0 684 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 HERVK_113Q902F9 699 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 PEX13Q92968 403 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CFAP36Q96G28 342 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CYLDQ9NQC7 956 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 MOCS1Q9NZB8 636 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CFL2Q9Y281 166 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CNTNAP4Q9C0A0 1308 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CARMIL3Q8ND23 1372 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 GSTA2P09210 222 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CDK4P11802 303 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 NIPAL4Q0D2K0 466 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CETN1Q12798 172 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 EZH2Q15910 746 aaKnown RBP9.89□□□□□ -0.83
USB1-216ENST00000624720 PDCD4Q53EL6 469 aaKnown RBP9.89□□□□□ -0.83
USB1-216ENST00000624720 TRIM68Q6AZZ1 485 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 TMEM154Q6P9G4 183 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CYP26C1Q6V0L0 522 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 ADGRA1Q86SQ6 560 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 NOP9Q86U38 636 aaKnown RBP9.89□□□□□ -0.83
USB1-216ENST00000624720 CHPFQ8IZ52 775 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 MYL10Q9BUA6 226 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 MXD3Q9BW11 206 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CNGB3Q9NQW8 809 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 DDX56Q9NY93 547 aaKnown RBP9.89□□□□□ -0.83
USB1-216ENST00000624720 GIT1Q9Y2X7 761 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 TAF1P21675 1872 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 PLSCR1O15162 318 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 GNA14O95837 355 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CYP7A1P22680 504 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 GJB2P29033 226 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 WEE1P30291 646 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 SERPINB6P35237 376 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 AP3M2P53677 418 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 KIF22Q14807 665 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
USB1-216ENST00000624720 NAALADL2Q58DX5 795 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 TJAP1Q5JTD0 557 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 PPP4R4Q6NUP7 873 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 KLC3Q6P597 504 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 LENG1Q96BZ8 264 aaPredicted RBP9.89□□□□□ -0.83
USB1-216ENST00000624720 HGH1Q9BTY7 390 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 DSEQ9UL01 958 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 LIMCH1Q9UPQ0 1083 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 RGPD3A6NKT7 1758 aaPredicted RBP9.88□□□□□ -0.83
USB1-216ENST00000624720 RGPD4Q7Z3J3 1758 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 MROH5Q6ZUA9 1318 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 TOP1P11387 765 aaKnown RBP9.88□□□□□ -0.83
USB1-216ENST00000624720 PRDX5P30044 214 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 GBP1P32455 592 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 KCNJ6P48051 423 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 GSDMDP57764 484 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 UBE2HP62256 183 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 CD83Q01151 205 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 MCL1Q07820 350 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 PLEKHG6Q3KR16 790 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 NAA35Q5VZE5 725 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 OTUD7BQ6GQQ9 843 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 HIBCHQ6NVY1 386 aaPredicted RBP9.88□□□□□ -0.83
USB1-216ENST00000624720 PHLDB2Q86SQ0 1253 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 COL23A1Q86Y22 540 aaPredicted RBP9.88□□□□□ -0.83
USB1-216ENST00000624720 LCORLQ8N3X6 602 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 IRGQQ8WZA9 623 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 CDKL2Q92772 493 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 IFT43Q96FT9 208 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 NELL2Q99435 816 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 PSTPIP2Q9H939 334 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 EHMT1Q9H9B1 1298 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 TBCCD1Q9NVR7 557 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 STIM2Q9P246 746 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 PDP2Q9P2J9 529 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 RABGAP1Q9Y3P9 1069 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 PAPPAQ13219 1627 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 MED23Q9ULK4 1368 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 GOLGA8CPA6NN73 597 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 NCK2O43639 380 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 STRNO43815 780 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 TUBBP07437 444 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 PLCG2P16885 1265 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 PRKACAP17612 351 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 RFC5P40937 340 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 ADARP55265 1226 aaKnown RBP9.88□□□□□ -0.83
USB1-216ENST00000624720 ARMC4Q5T2S8 1044 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 METTL21CQ5VZV1 264 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 CAND1Q86VP6 1230 aaKnown RBP9.88□□□□□ -0.83
USB1-216ENST00000624720 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.88□□□□□ -0.83
USB1-216ENST00000624720 NLGN1Q8N2Q7 840 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 AGAP11Q8TF27 550 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 EGLN2Q96KS0 407 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 ACAP3Q96P50 834 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 TUBGCP5Q96RT8 1024 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 MRPL9Q9BYD2 267 aaKnown RBP9.88□□□□□ -0.83
USB1-216ENST00000624720 FAM192AQ9GZU8 254 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 DLGAP2Q9P1A6 1054 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms