RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 THOC5Q13769 683 aaKnown RBP10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 ADCK5Q3MIX3 580 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 FBF1Q8TES7 1133 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 CLIC6Q96NY7 704 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 RNF14Q9UBS8 474 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 SPATA24Q86W54 205 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 SCN4BQ8IWT1 228 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 CCDC170Q8IYT3 715 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 RAB3IPQ96QF0 476 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 VPS37BQ9H9H4 285 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 JRKLQ9Y4A0 524 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 SYNJ2BP-COX16A0A087WUM0 186 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 HSPA8P11142 646 aaKnown RBP10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 RASA1P20936 1047 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 PCSK1P29120 753 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 HHATQ5VTY9 493 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 USP17L6PQ6QN14 398 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 AFG1LQ8WV93 481 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 MRPL9Q9BYD2 267 aaKnown RBP10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 COX16Q9P0S2 106 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 FAN1Q9Y2M0 1017 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 GDAQ9Y2T3 454 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 PCDHB12Q9Y5F1 795 aa10.47□□□□□ -0.73
TNFRSF9-204ENST00000615230 EIF3DO15371 548 aaKnown RBP eCLIP10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 LRG1P02750 347 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 RNASE9P60153 205 aaKnown RBP10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 CYFIP1Q7L576 1253 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 PSMD3O43242 534 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 TBC1D8O95759 1140 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 ADCY8P40145 1251 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 EMC2Q15006 297 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 PDIA6Q15084 440 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 RGMBQ6NW40 437 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 DAGLBQ8NCG7 672 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 SLC44A5Q8NCS7 719 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 MSRAQ9UJ68 235 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 AGO2Q9UKV8 859 aaKnown RBP10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 KDM1AO60341 852 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 KNOP1Q1ED39 458 aaKnown RBP10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 PBKQ96KB5 322 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 DDX56Q9NY93 547 aaKnown RBP10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 ZKSCAN5Q9Y2L8 839 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 ANGPTL3Q9Y5C1 460 aa10.46□□□□□ -0.73
TNFRSF9-204ENST00000615230 CLIC2O15247 247 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 NR3C1P04150 777 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 ABCB4P21439 1286 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 PAX3P23760 479 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 ACADSBP45954 432 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 SLFNL1Q499Z3 407 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 DENND2CQ68D51 928 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 ENOX1Q8TC92 643 aaKnown RBP10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 RBM41Q96IZ5 413 aaKnown RBP10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 TMX2Q9Y320 296 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 IPPQ9Y573 584 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 GNRH1P01148 92 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 VIL1P09327 827 aaKnown RBP10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 ODC1P11926 461 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 DSG3P32926 999 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 TFDP2Q14188 446 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 TRIM42Q8IWZ5 723 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 CDK5RAP1Q96SZ6 601 aaKnown RBP10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 MAN1B1Q9UKM7 699 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 MYPNQ86TC9 1320 aa10.46□□□□□ -0.74
TNFRSF9-204ENST00000615230 SLC16A4O15374 487 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PLS3P13797 630 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PARD3BQ8TEW8 1205 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 MRFAP1L1Q96HT8 127 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 STK39Q9UEW8 545 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PPP1R9AQ9ULJ8 1098 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZC3H4Q9UPT8 1303 aaKnown RBP10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 DYNC1I1O14576 645 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 EFCAB14O75071 495 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 ALDH1A3P47895 512 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 ALDH7A1P49419 539 aaKnown RBP10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 COASYQ13057 564 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 TMEM132DQ14C87 1099 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 ITPRIPL1Q6GPH6 555 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 RASEFQ8IZ41 740 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 TTI1O43156 1089 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PDHBP11177 359 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 VAMP7P51809 220 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 CDK17Q00537 523 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 RESTQ13127 1097 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 SFR1Q86XK3 245 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 TGFB3P10600 412 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 AXLP30530 894 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 SGO2Q562F6 1265 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 SHCBP1Q8NEM2 672 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PLCD4Q9BRC7 762 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PITPNM2Q9BZ72 1349 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 SLC15A5A6NIM6 579 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 KRIT1O00522 736 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PPP2R5DQ14738 602 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 EFHC2Q5JST6 749 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PCGF5Q86SE9 256 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 RNF149Q8NC42 400 aa10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 RBAKQ9NYW8 714 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF9-204ENST00000615230 PCDHB6Q9Y5E3 794 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms