RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 GNA11P29992 359 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 GRIK4Q16099 956 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 C19orf48Q6RUI8 117 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 CCDC148Q8NFR7 591 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 PGBD1Q96JS3 809 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
CCDC47-206ENST00000584112 ZMYND12Q9H0C1 365 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 GMEB2Q9UKD1 530 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 FREM2Q5SZK8 3169 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 ASXL3Q9C0F0 2248 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 KALRNO60229 2985 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 ACTR2P61160 394 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 TDGQ13569 410 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 TMEM184AQ6ZMB5 413 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 PDZD3Q86UT5 571 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 REXO1Q8N1G1 1221 aaKnown RBP12.63□□□□□ -0.39
CCDC47-206ENST00000584112 FEZF2Q8TBJ5 459 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 BICD2Q8TD16 824 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 ATRIPQ8WXE1 791 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 ZNF689Q96CS4 500 aaPredicted RBP12.63□□□□□ -0.39
CCDC47-206ENST00000584112 AGO4Q9HCK5 861 aaKnown RBP12.63□□□□□ -0.39
CCDC47-206ENST00000584112 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
CCDC47-206ENST00000584112 MBLAC1A4D2B0 266 aaPredicted RBP12.62□□□□□ -0.39
CCDC47-206ENST00000584112 TOP3BO95985 862 aaKnown RBP12.62□□□□□ -0.39
CCDC47-206ENST00000584112 CYP3A4P08684 503 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 IFNAR1P17181 557 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 SLC26A2P50443 739 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 EVCP57679 992 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 ERVFC1P60507 584 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 SETQ01105 290 aaPredicted RBP12.62□□□□□ -0.39
CCDC47-206ENST00000584112 CSTF1Q05048 431 aaKnown RBP12.62□□□□□ -0.39
CCDC47-206ENST00000584112 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 PLPPR4Q7Z2D5 763 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 PLA2G4DQ86XP0 818 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 SIT1Q9Y3P8 196 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 CYP46A1Q9Y6A2 500 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 SPTA1P02549 2419 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 PATJQ8NI35 1801 aa12.62□□□□□ -0.39
CCDC47-206ENST00000584112 FNDC1Q4ZHG4 1894 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-206ENST00000584112 PTPN13Q12923 2485 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 MIA3Q5JRA6 1907 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 TICRRQ7Z2Z1 1910 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 TMEM8BA6NDV4 472 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 ATG7O95352 703 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 INSRRP14616 1297 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 PDIA3P30101 505 aaKnown RBP12.61□□□□□ -0.39
CCDC47-206ENST00000584112 STAT5BP51692 787 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 IGBP1P78318 339 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 ITGB3BPQ13352 177 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-206ENST00000584112 NTRK3Q16288 839 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 FAM160B1Q5W0V3 765 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 RUFY4Q6ZNE9 571 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 CRYGNQ8WXF5 182 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
CCDC47-206ENST00000584112 PHKBQ93100 1093 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 PCYT2Q99447 389 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
CCDC47-206ENST00000584112 SLC26A6Q9BXS9 759 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 TM6SF1Q9BZW5 370 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 FOXQ1Q9C009 403 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 TCEAL9Q9UHQ7 104 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 PCDHGA2Q9Y5H1 932 aa12.61□□□□□ -0.39
CCDC47-206ENST00000584112 IGLV3-22A0A075B6J6 115 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 FAM86B1E9PN63 330 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 M0QZ92 97 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 IPO5O00410 1097 aaKnown RBP12.6□□□□□ -0.39
CCDC47-206ENST00000584112 CHRNA1P02708 482 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 FAM86B2P0C5J1 330 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 CCT2P78371 535 aaKnown RBP12.6□□□□□ -0.39
CCDC47-206ENST00000584112 MRPS6P82932 125 aaKnown RBP12.6□□□□□ -0.39
CCDC47-206ENST00000584112 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
CCDC47-206ENST00000584112 MGAT3Q09327 533 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 PLCB4Q15147 1175 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 ZNF528Q3MIS6 628 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 PAN2Q504Q3 1202 aaKnown RBP12.6□□□□□ -0.39
CCDC47-206ENST00000584112 NAALADL2Q58DX5 795 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 MARCH8Q5T0T0 291 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 IER5Q5VY09 327 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 IL31Q6EBC2 164 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 CPLX2Q6PUV4 134 aaKnown RBP12.6□□□□□ -0.39
CCDC47-206ENST00000584112 PRR23CQ6ZRP0 262 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 DNAJB3Q8WWF6 145 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 GATA6Q92908 595 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 NECTIN4Q96NY8 510 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 ADAM33Q9BZ11 813 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 ADAM7Q9H2U9 754 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 SH3GLB2Q9NR46 395 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 CYP26B1Q9NR63 512 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 TBC1D22BQ9NU19 505 aa12.6□□□□□ -0.39
CCDC47-206ENST00000584112 COL1A2P08123 1366 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 IGKV6D-21A0A0A0MT36 114 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
CCDC47-206ENST00000584112 CPLX1O14810 134 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms