RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 RPL11P62913 178 aaKnown RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 PRR5P85299 388 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 HSP90AA2PQ14568 343 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 SLC9A5Q14940 896 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 TARBP2Q15633 366 aaKnown RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 SF1Q15637 639 aaKnown RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 PRSS53Q2L4Q9 553 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 KRT24Q2M2I5 525 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 DCP2Q8IU60 420 aaKnown RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 CCDC103Q8IW40 242 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 TMEM151BQ8IW70 566 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 LRRC47Q8N1G4 583 aaKnown RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 Q8N1Y9 231 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 TMEM145Q8NBT3 493 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 IL17REQ8NFR9 667 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 PLEKHO2Q8TD55 490 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 USP33Q8TEY7 942 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 KCTD13Q8WZ19 329 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 DPF3Q92784 378 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 KIF1BPQ96EK5 621 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 GPATCH3Q96I76 525 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 RNF38Q9H0F5 515 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 SAGE1Q9NXZ1 904 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 DBF4Q9UBU7 674 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 TMEFF2Q9UIK5 374 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 TIMM13Q9Y5L4 95 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 HCFC2Q9Y5Z7 792 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 TTC41PQ6P2S7 1318 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 BUB1BO60566 1050 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-217ENST00000567817 DDX58O95786 925 aaKnown RBP6.26□□□□□ -1.41
CAPN3-217ENST00000567817 MBD3O95983 291 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 FUCA1P04066 466 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 LTBRP36941 435 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 EIF4A1P60842 406 aaKnown RBP6.26□□□□□ -1.41
CAPN3-217ENST00000567817 TEFQ10587 303 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 MTX1Q13505 466 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 C1orf141Q5JVX7 400 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 SLC35F1Q5T1Q4 408 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 LCNL1Q6ZST4 164 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 TMEFF1Q8IYR6 380 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 GPC2Q8N158 579 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 AARSD1Q9BTE6 412 aaKnown RBP6.26□□□□□ -1.41
CAPN3-217ENST00000567817 BRIP1Q9BX63 1249 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 IRF2BPLQ9H1B7 796 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 NARFQ9UHQ1 456 aa6.26□□□□□ -1.41
CAPN3-217ENST00000567817 MYH14Q7Z406 1995 aaKnown RBP6.26□□□□□ -1.41
CAPN3-217ENST00000567817 HIP1O00291 1037 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 GLRX3O76003 335 aaKnown RBP6.25□□□□□ -1.41
CAPN3-217ENST00000567817 SERPINB2P05120 415 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 IGFBP6P24592 240 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-217ENST00000567817 GTF2F1P35269 517 aaKnown RBP eCLIP6.25□□□□□ -1.41
CAPN3-217ENST00000567817 GRIA2P42262 883 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 NOGQ13253 232 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 RASGRF1Q13972 1273 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 NFIXQ14938 502 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 SF3A1Q15459 793 aaKnown RBP6.25□□□□□ -1.41
CAPN3-217ENST00000567817 PKN2Q16513 984 aaKnown RBP6.25□□□□□ -1.41
CAPN3-217ENST00000567817 HABP4Q5JVS0 413 aaKnown RBP6.25□□□□□ -1.41
CAPN3-217ENST00000567817 MROH9Q5TGP6 573 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 TCERG1LQ5VWI1 586 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 STYK1Q6J9G0 422 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 G2E3Q7L622 706 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 TICAM2Q86XR7 235 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 RIOX2Q8IUF8 465 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 TEX2Q8IWB9 1127 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 RUFY2Q8WXA3 655 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 DNAAF4Q8WXU2 420 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 ALG3Q92685 438 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 IER2Q9BTL4 223 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 USP44Q9H0E7 712 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 GRPEL1Q9HAV7 217 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 HYPKQ9NX55 129 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 MIS18AQ9NYP9 233 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 SIRPGQ9P1W8 387 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 SRP68Q9UHB9 627 aaKnown RBP6.25□□□□□ -1.41
CAPN3-217ENST00000567817 NPFFR2Q9Y5X5 522 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 ADAMTS7Q9UKP4 1686 aa6.25□□□□□ -1.41
CAPN3-217ENST00000567817 AFDNP55196 1824 aaKnown RBP6.25□□□□□ -1.41
CAPN3-217ENST00000567817 ARFGEF2Q9Y6D5 1785 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 CARMIL3Q8ND23 1372 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 C22orf46C9J442 243 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 ARNTLO00327 626 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 PDPK1O15530 556 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 BAG4O95429 457 aaKnown RBP6.24□□□□□ -1.41
CAPN3-217ENST00000567817 NTRK1P04629 796 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 FGFR1P11362 822 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 XRCC6P12956 609 aaKnown RBP eCLIP6.24□□□□□ -1.41
CAPN3-217ENST00000567817 NCAM1P13591 858 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 CHMLP26374 656 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 SLC6A11P48066 632 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 NCKAP1LP55160 1127 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 CCDC173Q0VFZ6 552 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 CUL4AQ13619 759 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 CCDC93Q567U6 631 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 DENND5AQ6IQ26 1287 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 CYP4F22Q6NT55 531 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 NLRP10Q86W26 655 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 FAM129CQ86XR2 697 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms