RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
CAPN3-217ENST00000567817 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
CAPN3-217ENST00000567817 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
CAPN3-217ENST00000567817 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
CAPN3-217ENST00000567817 FOXD1Q16676 465 aa18.72■□□□□ 0.59
CAPN3-217ENST00000567817 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
CAPN3-217ENST00000567817 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
CAPN3-217ENST00000567817 ADRA2BP18089 450 aa17.86■□□□□ 0.45
CAPN3-217ENST00000567817 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
CAPN3-217ENST00000567817 MSH5O43196 834 aa17.38■□□□□ 0.37
CAPN3-217ENST00000567817 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
CAPN3-217ENST00000567817 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
CAPN3-217ENST00000567817 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
CAPN3-217ENST00000567817 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
CAPN3-217ENST00000567817 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
CAPN3-217ENST00000567817 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
CAPN3-217ENST00000567817 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
CAPN3-217ENST00000567817 KCNA4P22459 653 aa15.87■□□□□ 0.13
CAPN3-217ENST00000567817 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
CAPN3-217ENST00000567817 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
CAPN3-217ENST00000567817 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
CAPN3-217ENST00000567817 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
CAPN3-217ENST00000567817 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
CAPN3-217ENST00000567817 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
CAPN3-217ENST00000567817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.95□□□□□ -0.02
CAPN3-217ENST00000567817 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
CAPN3-217ENST00000567817 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
CAPN3-217ENST00000567817 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-217ENST00000567817 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
CAPN3-217ENST00000567817 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
CAPN3-217ENST00000567817 ZBTB22O15209 634 aa14.58□□□□□ -0.08
CAPN3-217ENST00000567817 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
CAPN3-217ENST00000567817 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-217ENST00000567817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
CAPN3-217ENST00000567817 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
CAPN3-217ENST00000567817 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
CAPN3-217ENST00000567817 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-217ENST00000567817 APLP2Q06481 763 aa14.42□□□□□ -0.1
CAPN3-217ENST00000567817 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
CAPN3-217ENST00000567817 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-217ENST00000567817 CAPN15O75808 1086 aa14.27□□□□□ -0.13
CAPN3-217ENST00000567817 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
CAPN3-217ENST00000567817 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
CAPN3-217ENST00000567817 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
CAPN3-217ENST00000567817 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-217ENST00000567817 DSG3P32926 999 aa14.08□□□□□ -0.16
CAPN3-217ENST00000567817 ABCB7O75027 752 aa13.96□□□□□ -0.17
CAPN3-217ENST00000567817 POLA2Q14181 598 aa13.89□□□□□ -0.19
CAPN3-217ENST00000567817 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
CAPN3-217ENST00000567817 FBLN2P98095 1184 aa13.6□□□□□ -0.23
CAPN3-217ENST00000567817 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-217ENST00000567817 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
CAPN3-217ENST00000567817 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
CAPN3-217ENST00000567817 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
CAPN3-217ENST00000567817 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
CAPN3-217ENST00000567817 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
CAPN3-217ENST00000567817 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
CAPN3-217ENST00000567817 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
CAPN3-217ENST00000567817 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
CAPN3-217ENST00000567817 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
CAPN3-217ENST00000567817 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-217ENST00000567817 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
CAPN3-217ENST00000567817 FKBP8Q14318 412 aa13.03□□□□□ -0.32
CAPN3-217ENST00000567817 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-217ENST00000567817 PROM2Q8N271 834 aa12.96□□□□□ -0.33
CAPN3-217ENST00000567817 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
CAPN3-217ENST00000567817 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
CAPN3-217ENST00000567817 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
CAPN3-217ENST00000567817 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
CAPN3-217ENST00000567817 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
CAPN3-217ENST00000567817 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
CAPN3-217ENST00000567817 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
CAPN3-217ENST00000567817 POTEHQ6S545 545 aa12.67□□□□□ -0.38
CAPN3-217ENST00000567817 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
CAPN3-217ENST00000567817 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
CAPN3-217ENST00000567817 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
CAPN3-217ENST00000567817 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
CAPN3-217ENST00000567817 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
CAPN3-217ENST00000567817 MIER1Q8N108 512 aa12.47□□□□□ -0.41
CAPN3-217ENST00000567817 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-217ENST00000567817 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
CAPN3-217ENST00000567817 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-217ENST00000567817 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-217ENST00000567817 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-217ENST00000567817 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
CAPN3-217ENST00000567817 HAX1O00165 279 aa12.33□□□□□ -0.44
CAPN3-217ENST00000567817 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
CAPN3-217ENST00000567817 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
CAPN3-217ENST00000567817 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-217ENST00000567817 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
CAPN3-217ENST00000567817 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-217ENST00000567817 NUBP1P53384 320 aa12.19□□□□□ -0.46
CAPN3-217ENST00000567817 EVX2Q03828 476 aa12.18□□□□□ -0.46
CAPN3-217ENST00000567817 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
CAPN3-217ENST00000567817 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
CAPN3-217ENST00000567817 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
CAPN3-217ENST00000567817 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-217ENST00000567817 FAM212AQ96EL1 285 aa12.13□□□□□ -0.47
CAPN3-217ENST00000567817 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
CAPN3-217ENST00000567817 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms