RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 A0A0G2JLL6 359 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 A0A0U1RQG5 324 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 CXCL11O14625 94 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 ZNF185O15231 689 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 DKC1O60832 514 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 ATP9AO75110 1047 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 ANXA13P27216 316 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 TNNT3P45378 269 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 FSTL1Q12841 308 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 MAPK7Q13164 816 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 PRRT2Q7Z6L0 340 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 RIOX2Q8IUF8 465 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 CREG2Q8IUH2 290 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 FAM178BQ8IXR5 827 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 GOLGA5Q8TBA6 731 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 CLMNQ96JQ2 1002 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 MKNK1Q9BUB5 465 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 ANKEF1Q9NU02 776 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 LARSQ9P2J5 1176 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 SAMM50Q9Y512 469 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 PCDHB13Q9Y5F0 798 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 PFASO15067 1338 aa12.62□□□□□ -0.39
PRPF40B-203ENST00000508736 SPDYE5A6NIY4 337 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 H3BQF6 201 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 IRF6O14896 467 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 TLR2O60603 784 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 PPP1R37O75864 691 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 NR3C1P04150 777 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 YWHABP31946 246 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 FKBP1BP68106 108 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 C2orf54Q08AI8 447 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 MYBPC2Q14324 1141 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 EXOC3L4Q17RC7 722 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 GNPTABQ3T906 1256 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 DAW1Q8N136 415 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 CCDC102AQ96A19 550 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 PKNOX2Q96KN3 472 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 MOV10L1Q9BXT6 1211 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 PSD3Q9NYI0 1048 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 PKD2L1Q9P0L9 805 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 ZMYM2Q9UBW7 1377 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 SFI1A8K8P3 1242 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 PDE2AO00408 941 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 TGFB1I1O43294 461 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 CCNE2O96020 404 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 KCNA2P16389 499 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 ICAM3P32942 547 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 NAB2Q15742 525 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 IFI16Q16666 785 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 ODR4Q5SWX8 454 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 TREML2Q5T2D2 321 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 LDLRAD1Q5T700 205 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 VPS36Q86VN1 386 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 FAM133AQ8N9E0 248 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 SLC17A8Q8NDX2 589 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 ST6GALNAC4Q9H4F1 302 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 FBXL5Q9UKA1 691 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 KCNH4Q9UQ05 1017 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 PCDHA10Q9Y5I2 948 aa12.61□□□□□ -0.39
PRPF40B-203ENST00000508736 BTNL10A8MVZ5 291 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 SPATA31C2B4DYI2 1134 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 HIP1RO75146 1068 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 RGS20O76081 388 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 NMT1P30419 496 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 CFAP221Q4G0U5 840 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 DCAF17Q5H9S7 520 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 NFRKBQ6P4R8 1299 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 HS2ST1Q7LGA3 356 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 SLC9A9Q8IVB4 645 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 SLC10A4Q96EP9 437 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 SUGCTQ9HAC7 445 aa12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 ZCCHC17Q9NP64 241 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-203ENST00000508736 AKAP3O75969 853 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 UCHL3P15374 230 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 HUNKP57058 714 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 ARID5AQ03989 594 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 PPIL2Q13356 520 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 PLS1Q14651 629 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 GLE1Q53GS7 698 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 KLHDC7AQ5VTJ3 777 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 TCERG1LQ5VWI1 586 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 ANKRD13CQ8N6S4 541 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 GOLGA6L1Q8N7Z2 621 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 COG1Q8WTW3 980 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 BORCS6Q96GS4 357 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms