RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 CGNQ9P2M7 1197 aaKnown RBP10.48□□□□□ -0.73
CTSA-208ENST00000485627 NRBP1Q9UHY1 535 aa10.48□□□□□ -0.73
CTSA-208ENST00000485627 ZNF215Q9UL58 517 aaPredicted RBP10.48□□□□□ -0.73
CTSA-208ENST00000485627 TRPC6Q9Y210 931 aa10.48□□□□□ -0.73
CTSA-208ENST00000485627 TRAF3IP3Q9Y228 551 aa10.48□□□□□ -0.73
CTSA-208ENST00000485627 PTPN22Q9Y2R2 807 aa10.48□□□□□ -0.73
CTSA-208ENST00000485627 LRRC37A2A6NM11 1700 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.47□□□□□ -0.73
CTSA-208ENST00000485627 LGALS16A8MUM7 142 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 SLC16A4O15374 487 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 GAS2O43903 313 aaKnown RBP10.47□□□□□ -0.73
CTSA-208ENST00000485627 EPB41P11171 864 aaKnown RBP10.47□□□□□ -0.73
CTSA-208ENST00000485627 SMPD1P17405 629 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 SCP2P22307 547 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 PTGS1P23219 599 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 SFPQP23246 707 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTSA-208ENST00000485627 NPTX2P47972 431 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 DNM2P50570 870 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 PLCB4Q15147 1175 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 MAN2A1Q16706 1144 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 DGKDQ16760 1214 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 CCDC144BQ3MJ40 725 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 GJC2Q5T442 439 aaPredicted RBP10.47□□□□□ -0.73
CTSA-208ENST00000485627 MFSD14CQ5VZR4 134 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 HAUS6Q7Z4H7 955 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 ZSCAN30Q86W11 494 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 AFG1LQ8WV93 481 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 TCP11Q8WWU5 503 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 HVCN1Q96D96 273 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 KATNBL1Q9H079 304 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 ST6GALNAC4Q9H4F1 302 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 DHX33Q9H6R0 707 aaKnown RBP10.47□□□□□ -0.73
CTSA-208ENST00000485627 PDLIM7Q9NR12 457 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 GJD2Q9UKL4 321 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 FAM184BQ9ULE4 1060 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTSA-208ENST00000485627 ZNF236Q9UL36 1845 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 PLXNA1Q9UIW2 1896 aa10.47□□□□□ -0.73
CTSA-208ENST00000485627 CLIC2O15247 247 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 SLC16A3O15427 465 aaKnown RBP10.46□□□□□ -0.73
CTSA-208ENST00000485627 DYNC1LI2O43237 492 aaPredicted RBP10.46□□□□□ -0.73
CTSA-208ENST00000485627 TEX33O43247 280 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 PPFIA4O75335 1185 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 NR3C1P04150 777 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 LGALS2P05162 132 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 CYP2C19P33261 490 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 PSEN1P49768 467 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 NCKAP1LP55160 1127 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 SNRPFP62306 86 aaKnown RBP10.46□□□□□ -0.73
CTSA-208ENST00000485627 LACTBP83111 547 aaPredicted RBP10.46□□□□□ -0.73
CTSA-208ENST00000485627 GTF2BQ00403 316 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 SP3Q02447 781 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 PPP2R3AQ06190 1150 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 TRIM14Q14142 442 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 CCL14Q16627 93 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 NFIL3Q16649 462 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 VWA3BQ502W6 1294 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 ZNF484Q5JVG2 852 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 TMEM63BQ5T3F8 832 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 IER5Q5VY09 327 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 CEP135Q66GS9 1140 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 CHRDL2Q6WN34 429 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 LRRC55Q6ZSA7 311 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 APTXQ7Z2E3 356 aaKnown RBP10.46□□□□□ -0.73
CTSA-208ENST00000485627 DEPTORQ8TB45 409 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 TMEM143Q96AN5 459 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.73
CTSA-208ENST00000485627 ZNF830Q96NB3 372 aaPredicted RBP10.46□□□□□ -0.73
CTSA-208ENST00000485627 FIZ1Q96SL8 496 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 CFHR5Q9BXR6 569 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 AP5M1Q9H0R1 490 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 METTL14Q9HCE5 456 aaKnown RBP10.46□□□□□ -0.73
CTSA-208ENST00000485627 XPNPEP1Q9NQW7 623 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 INTS13Q9NVM9 706 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 FRMD4BQ9Y2L6 1034 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 ZKSCAN5Q9Y2L8 839 aa10.46□□□□□ -0.73
CTSA-208ENST00000485627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.46□□□□□ -0.73
CTSA-208ENST00000485627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.46□□□□□ -0.73
CTSA-208ENST00000485627 DOCK5Q9H7D0 1870 aa10.46□□□□□ -0.74
CTSA-208ENST00000485627 ITIH6Q6UXX5 1313 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 DENND3A2RUS2 1198 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 ESPNB1AK53 854 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 TGFB1I1O43294 461 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 MAFO75444 373 aaPredicted RBP10.45□□□□□ -0.74
CTSA-208ENST00000485627 PPP1R37O75864 691 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 MMP3P08254 477 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
CTSA-208ENST00000485627 HOXD10P28358 340 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 PSMC2P35998 433 aaKnown RBP10.45□□□□□ -0.74
CTSA-208ENST00000485627 NAMPTP43490 491 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 KCNA1Q09470 495 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 STRN3Q13033 797 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 MYBPC2Q14324 1141 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 TARBP2Q15633 366 aaKnown RBP10.45□□□□□ -0.74
CTSA-208ENST00000485627 PRAMEF19Q5SWL8 479 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 FRMD5Q7Z6J6 570 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 KSR1Q8IVT5 923 aa10.45□□□□□ -0.74
CTSA-208ENST00000485627 ZC3H3Q8IXZ2 948 aaKnown RBP10.45□□□□□ -0.74
CTSA-208ENST00000485627 RETREG2Q8NC44 543 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms