RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 NEDD9Q14511 834 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 PPP2R5AQ15172 486 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 CCDC40Q4G0X9 1142 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 CEP135Q66GS9 1140 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 MIS18BP1Q6P0N0 1132 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 ZNF720Q7Z2F6 126 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 SFR1Q86XK3 245 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 FAM178BQ8IXR5 827 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 ANKRD35Q8N283 1001 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 MCPH1Q8NEM0 835 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 MYRIPQ8NFW9 859 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 SPIRE2Q8WWL2 714 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 KIFAP3Q92845 792 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 GJA10Q969M2 543 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 CCDC43Q96MW1 224 aaKnown RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 RUSC1Q9BVN2 902 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 STRA6Q9BX79 667 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 JPH1Q9HDC5 661 aaPredicted RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 HOMER2Q9NSB8 354 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 SCAF8Q9UPN6 1271 aaKnown RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 EXOC7Q9UPT5 735 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 PPP2R2CQ9Y2T4 447 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 RIPK3Q9Y572 518 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.33□□□□□ -1.24
LDB3-206ENST00000477489 ATP8B3O60423 1300 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 IGSF9BQ9UPX0 1349 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 DYNC1I1O14576 645 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 KIAA0391O15091 583 aaKnown RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 PMM2O15305 246 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 P4HA2O15460 535 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 DGAT1O75907 488 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 ATG7O95352 703 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 GCNT3O95395 438 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 EPB41P11171 864 aaKnown RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 CETPP11597 493 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 MYCLP12524 364 aaPredicted RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 PLS3P13797 630 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 CYLC1P35663 651 aaPredicted RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 PSMC2P35998 433 aaKnown RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 GCLCP48506 637 aaPredicted RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 FXR1P51114 621 aaKnown RBP eCLIP7.32□□□□□ -1.24
LDB3-206ENST00000477489 ALDH5A1P51649 535 aaPredicted RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 SMTNP53814 917 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 ADKP55263 362 aaKnown RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 SOX10P56693 466 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 TUBB4BP68371 445 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 UBXN2AP68543 259 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 KRT83P78385 493 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 CCNA1P78396 465 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 DEFB115Q30KQ5 88 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 HSP90AA4PQ58FG1 418 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 XKR3Q5GH77 459 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 ODR4Q5SWX8 454 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 PRAMEF18Q5VWM3 479 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 USP37Q86T82 979 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 ABRAQ8N0Z2 381 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 MYCT1Q8N699 235 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 FAM133AQ8N9E0 248 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 MORC4Q8TE76 937 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 HPS3Q969F9 1004 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 C16orf45Q96MC5 204 aaPredicted RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 FIZ1Q96SL8 496 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 NTPCRQ9BSD7 190 aaKnown RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 GBP3Q9H0R5 595 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 ASCC2Q9H1I8 757 aaPredicted RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 ZHX3Q9H4I2 956 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 ELP3Q9H9T3 547 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 PLCB1Q9NQ66 1216 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 TBC1D7Q9P0N9 293 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 CEP72Q9P209 647 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 SLC9A2Q9UBY0 812 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 ARMCX3Q9UH62 379 aaPredicted RBP7.32□□□□□ -1.24
LDB3-206ENST00000477489 PLAGL2Q9UPG8 496 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 SIK3Q9Y2K2 1263 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 SAMM50Q9Y512 469 aa7.32□□□□□ -1.24
LDB3-206ENST00000477489 ASTN1O14525 1302 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 IGKV6D-21A0A0A0MT36 114 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 SSU72P8A0A1W2PR75 194 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 TTC26A0AVF1 554 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 TNFRSF10AO00220 468 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 HOXA2O43364 376 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 GAS2O43903 313 aaKnown RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 N4BP1O75113 896 aaKnown RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 CCNE2O96020 404 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 NR3C1P04150 777 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 SUPT20HL2P0C7V6 817 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 ZBTB48P10074 688 aaPredicted RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 XRCC5P13010 732 aaKnown RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 RFC5P40937 340 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 SLC26A2P50443 739 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 GTF2A2P52657 109 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 NCKAP1LP55160 1127 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 GTF2BQ00403 316 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 MAPK7Q13164 816 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 DGKZQ13574 1117 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 TTLL12Q14166 644 aaPredicted RBP7.31□□□□□ -1.24
LDB3-206ENST00000477489 KCTD2Q14681 263 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 LRRC41Q15345 812 aa7.31□□□□□ -1.24
LDB3-206ENST00000477489 TREML2Q5T2D2 321 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms