RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ANKRD20A8PQ5CZ79 823 aa13.48□□□□□ -0.25
HDAC4-208ENST00000463007 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
HDAC4-208ENST00000463007 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
HDAC4-208ENST00000463007 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
HDAC4-208ENST00000463007 MED24O75448 989 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 AKAP3O75969 853 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 Q4G0T1 1027 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 IRF2BP2Q7Z5L9 587 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 KIF2BQ8N4N8 673 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 PSMD1Q99460 953 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 PRMT1Q99873 361 aaKnown RBP13.47□□□□□ -0.25
HDAC4-208ENST00000463007 SLC12A6Q9UHW9 1150 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 PCDHA1Q9Y5I3 950 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 A6NNZ2 444 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 ZBTB39O15060 712 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 FLOT1O75955 427 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 TRIM49P0CI25 452 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 TRIM49CP0CI26 452 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 PON1P27169 355 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 CYP2J2P51589 502 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 MARSP56192 900 aaKnown RBP13.47□□□□□ -0.25
HDAC4-208ENST00000463007 NEDD9Q14511 834 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 TUBB8Q3ZCM7 444 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 TMC3Q7Z5M5 1100 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 ANKRD42Q8N9B4 389 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 CCDC26Q8TAB7 109 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 IQCDQ96DY2 449 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 FER1L6Q2WGJ9 1857 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 KDM3AQ9Y4C1 1321 aa13.47□□□□□ -0.25
HDAC4-208ENST00000463007 H0YGN5 161 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 NDUFB10O96000 172 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 KCNJ1P48048 391 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 VPS41P49754 854 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 SLC12A3P55017 1021 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 MYO1EQ12965 1108 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 SLC29A2Q14542 456 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 ZC2HC1CQ53FD0 456 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-208ENST00000463007 FAM228AQ86W67 206 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 FBXO25Q8TCJ0 367 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 TAS2R14Q9NYV8 317 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 AMFRQ9UKV5 643 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 NFS1Q9Y697 457 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 A0A1W2PRG0 241 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 F5H6K3 240 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 NEBLO76041 1014 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 UPP2O95045 317 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 AFPP02771 609 aaKnown RBP13.46□□□□□ -0.25
HDAC4-208ENST00000463007 EZRP15311 586 aaKnown RBP13.46□□□□□ -0.25
HDAC4-208ENST00000463007 CYP11B2P19099 503 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 CIITAP33076 1130 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 SREBF1P36956 1147 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 UBXN2AP68543 259 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 ICA1Q05084 483 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 KLRC3Q07444 240 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 ARSHQ5FYA8 562 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 PHLDB2Q86SQ0 1253 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 VPS36Q86VN1 386 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 BANK1Q8NDB2 785 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 SLC35G2Q8TBE7 412 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 EPS8L3Q8TE67 593 aaKnown RBP13.46□□□□□ -0.25
HDAC4-208ENST00000463007 ZNF622Q969S3 477 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDAC4-208ENST00000463007 ADAM33Q9BZ11 813 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 GANQ9H2C0 597 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 BHMT2Q9H2M3 363 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 KCTD10Q9H3F6 313 aa13.46□□□□□ -0.25
HDAC4-208ENST00000463007 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.26
HDAC4-208ENST00000463007 PAX7P23759 505 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 TNFRSF8P28908 595 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 ELF1P32519 619 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 CUL1Q13616 776 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 AOC3Q16853 763 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 PALB2Q86YC2 1186 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 C18orf8Q96DM3 657 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.26
HDAC4-208ENST00000463007 LRRC27Q9C0I9 530 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 RGL1Q9NZL6 768 aa13.46□□□□□ -0.26
HDAC4-208ENST00000463007 H0YIN7 160 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 PIK3CDO00329 1044 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.26
HDAC4-208ENST00000463007 TBX3O15119 743 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 RGS16O15492 202 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-208ENST00000463007 RASSF9O75901 435 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 CHRNA5P30532 468 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-208ENST00000463007 DR1Q01658 176 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 COG2Q14746 738 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-208ENST00000463007 LRRC34Q8IZ02 419 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 GDAP1Q8TB36 358 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 SCFD2Q8WU76 684 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 GMLQ99445 158 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 SH2D3AQ9BRG2 576 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 NT5C3AQ9H0P0 336 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 NUCKS1Q9H1E3 243 aaKnown RBP13.45□□□□□ -0.26
HDAC4-208ENST00000463007 SEMA4AQ9H3S1 761 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 VEZTQ9HBM0 779 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 KCNK9Q9NPC2 374 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 ACP6Q9NPH0 428 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 IGSF9BQ9UPX0 1349 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms