RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ANAPC15P60006 121 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 NPY5RQ15761 445 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 PTPN21Q16825 1174 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 FAM102BQ5T8I3 360 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 LLGL2Q6P1M3 1020 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 NEK8Q86SG6 692 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 ABI1Q8IZP0 508 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 ZNF710Q8N1W2 664 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 RNF169Q8NCN4 708 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 ETNPPLQ8TBG4 499 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 WASF1Q92558 559 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 SH2D3AQ9BRG2 576 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 PHF20Q9BVI0 1012 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 BRMS1Q9HCU9 246 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 TMEM161AQ9NX61 479 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 ORC3Q9UBD5 711 aaPredicted RBP17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 CDH22Q9UJ99 828 aa17.69■□□□□ 0.42
CHCHD3-204ENST00000457942 TMEM150BA6NC51 233 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 DDX11L8A8MPP1 907 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 HOXA2O43364 376 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 CCNT1O60563 726 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 EIF4BP23588 611 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 DNM2P50570 870 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 GPC3P51654 580 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 PIK3AP1Q6ZUJ8 805 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 THNSL1Q8IYQ7 743 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 LINC01465Q8N7H1 131 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 MBOAT7Q96N66 472 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 ADAMTS10Q9H324 1103 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 GJB4Q9NTQ9 266 aa17.68■□□□□ 0.42
CHCHD3-204ENST00000457942 GCFC2P16383 781 aaKnown RBP17.67■□□□□ 0.42
CHCHD3-204ENST00000457942 FGFR4P22455 802 aa17.67■□□□□ 0.42
CHCHD3-204ENST00000457942 PLPP4Q5VZY2 271 aa17.67■□□□□ 0.42
CHCHD3-204ENST00000457942 ASCL5Q7RTU5 278 aa17.67■□□□□ 0.42
CHCHD3-204ENST00000457942 GCOM2Q9BZD3 368 aaPredicted RBP17.67■□□□□ 0.42
CHCHD3-204ENST00000457942 ELAC1Q9H777 363 aaKnown RBP17.67■□□□□ 0.42
CHCHD3-204ENST00000457942 VPS13AQ96RL7 3174 aa17.67■□□□□ 0.42
CHCHD3-204ENST00000457942 DMDP11532 3685 aa17.67■□□□□ 0.42
CHCHD3-204ENST00000457942 SPTBN4Q9H254 2564 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 DARSP14868 501 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 LAG3P18627 525 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 KRT2P35908 639 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 ERVFC1P60507 584 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 PSMC5P62195 406 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 DRP2Q13474 957 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 DSC3Q14574 896 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 TARBP2Q15633 366 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 PLA2G4FQ68DD2 849 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 NECAB1Q8N987 351 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 OXER1Q8TDS5 423 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 NAP1L4Q99733 375 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 NIFKQ9BYG3 293 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 TMEM117Q9H0C3 514 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 SMOC2Q9H3U7 446 aa17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 TYW1Q9NV66 732 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-204ENST00000457942 DKC1O60832 514 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 CSDE1O75534 798 aaKnown RBP17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 FGF18O76093 207 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 SFPQP23246 707 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 TECP42680 631 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 FOSBP53539 338 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 DUSP6Q16828 381 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 NCAPH2Q6IBW4 605 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 B3GNT9Q6UX72 402 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 RHPN2Q8IUC4 686 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 LRRC43Q8N309 656 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 SUSD6Q92537 303 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 FAM20AQ96MK3 541 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 NLRP4Q96MN2 994 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 JPH2Q9BR39 696 aaPredicted RBP17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 DACT1Q9NYF0 836 aa17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 SUCLA2Q9P2R7 463 aaPredicted RBP17.65■□□□□ 0.42
CHCHD3-204ENST00000457942 CACNA1HO95180 2353 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 EML1O00423 815 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 QARSP47897 775 aaKnown RBP17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 FAM189BP81408 668 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 CDC42EP1Q00587 391 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 UBE3AQ05086 875 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 PPP2R5CQ13362 524 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 PPP4R3AQ6IN85 833 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 ECHDC2Q86YB7 292 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 GTF3C6Q969F1 213 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 KCNMB3Q9NPA1 279 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 VAV3Q9UKW4 847 aa17.64■□□□□ 0.41
CHCHD3-204ENST00000457942 A0A087WZ62 844 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 MAFO75444 373 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 ATF7P17544 494 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 NEK4P51957 841 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 POLGP54098 1239 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 NR5A1Q13285 461 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 TRIM29Q14134 588 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 ME3Q16798 604 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 TWF2Q6IBS0 349 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 ANO5Q75V66 913 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms